Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0841 |
Symbol | |
ID | 4570378 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 960545 |
End bp | 962368 |
Gene Length | 1824 bp |
Protein Length | 607 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639765439 |
Product | ABC transporter related |
Protein accession | YP_911316 |
Protein GI | 119356672 |
COG category | [V] Defense mechanisms |
COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCTGC AACAGAATAA CGCTCGAAAC CCGCTTGCAT CAATGCGCCA CAGAGGCGCC GGAAACCCTG GCCGAATTGA AAAATCGCGA AACCCCAAAG AGGCACTCAG GCGATTACTT GGATACCTTG CACCGTTCAG AATTAAACTG GTCACGGTTT CCCTTCTCGT CATCATCTAC ACGGCACTCG GACTTGCAGG GCCATACCTG ATAGGCGTAG CCATTGATCA ATTTATTGCA GCAAAAAACG TTGCCGGTCT TGAAAAAATC GCTCTCCTGA TGCTGCTGGT CTATCTTTTT TTTAACCTCT TCCAGCTCAT TGCAGGATGG ATTATGGCCA GCCTCTCCCA GACCGCACTG AAGCAGTTGA GCGGTGATCT TTTCGCACAT ATACAAACCC TGCCGGTCAG TTATTTCGAT CGTAACCCGT CAGGCGGCCT GATGAGCAGG CTGACCAACG ATATCGATGC CATTAACCAG GCCGTCTCGC AAAACGTTAC CTCGCTCATA GCAAGCGTGC TCTCCCTTGC CGGCGTCCTT GTCGTCATGT TTCTTCTCGA TGCATGGCTT GCCCTTGCAT CCCTGCTTGT GATCCCGCTC ATGATCTGGT TCACCCGGTT TGTTGCCCGC TACACCCGCA AAGGATTCAG GGAACTGCAA AAACAGCTTG GTGAAATGAA CAGTGTCACT GAAGAAGCAA TCAGCGGGCT TAAAGTGATC AAAGCCTTCA GACGACAAGC AGAGGTGATC GAACGATTCC GCATTCATAA TGACGGAGTT TTCAAAGCCG CCGTCGAAGC AAACAGCTAT GCACTGCTTC TCATGCCGCT CACCAATGTT CTGGGCAACC TCTTTGTCAT TGTCATTGCC GGTTTTGGCG GCTGGCTCGC CCTGAAAGAT CTGGTCAGCG TCGGCGTTAT CGCCACCTTT ATCATCTATG GCCAGAATCT TGTGCAACCT CTCCGGCAGC TTGCAAACAT GTACAACGCC ATTCAGGCCG CACTTGCCGG ATCAGAAAGA ATATTTGAAA TCCTCGACAT CCCCTCAGAA TTCGTCGCTC CGTCTGAATC CGGACCTCCC GAAAAAGCAG GAACCATCCG CTTCGATCAG GTGTCGTTTG CCTATGATGA AGGCACCCCG GTTGTCCGGA ACATGACGTT CACAGCCGAA GCCGGAAAAA CCATTGCGCT GGTCGGCCCG ACAGGAGCGG GAAAAACCAC GATCATCAAT CTTCTGACCC GTTTTTATGA ACTGCAAAGC GGCTCCATCA CCATTGACGG CACCGATATA CGCAGGATCG GCAAGGAAGC ATTACGCCGC AAACTCGGAC TGGTTCTTCA GGACACCTTT CTCTTTTCCG GAACAGTACT GGAAAACATC CGTTTCGGAC AGCTCAACGC CACTGACGAT GAGTGTATCC GCGCTGCGGA ACTTGCAGAA GCAGACCCCT TCATCCGCCT GCTCCCCCAA GGCTACAATA CCGTACTCTC CGAACGTGCA GGCAACCTGA GCCAGGGGCA GCGCCAGTTA CTGGCAATTA CCCGGGTTAT TCTTCTGAAC CCCGACATTC TGATTCTTGA CGAAGCGACA AGCAGCATCG ACACCCGAAC CGAACTCCGC ATCCAGAAAG CGCTGCTCCG GCTCATGGCC GGAAGAACAA GCTTTGTTAT CGTCCACCGG CTGAGCACCA TTCGGGACGC CGACCTGGTC CTTGTCATCG ACAACGGAAC CATTGTCGAA CAAGGAACCC ATCAGGAACT CCTTGAACAC CAGGGAGTCT ATTTCAACCT CTATATGAGC CAGTTCAAAG GCGTTGCGAT ATAG
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Protein sequence | MSLQQNNARN PLASMRHRGA GNPGRIEKSR NPKEALRRLL GYLAPFRIKL VTVSLLVIIY TALGLAGPYL IGVAIDQFIA AKNVAGLEKI ALLMLLVYLF FNLFQLIAGW IMASLSQTAL KQLSGDLFAH IQTLPVSYFD RNPSGGLMSR LTNDIDAINQ AVSQNVTSLI ASVLSLAGVL VVMFLLDAWL ALASLLVIPL MIWFTRFVAR YTRKGFRELQ KQLGEMNSVT EEAISGLKVI KAFRRQAEVI ERFRIHNDGV FKAAVEANSY ALLLMPLTNV LGNLFVIVIA GFGGWLALKD LVSVGVIATF IIYGQNLVQP LRQLANMYNA IQAALAGSER IFEILDIPSE FVAPSESGPP EKAGTIRFDQ VSFAYDEGTP VVRNMTFTAE AGKTIALVGP TGAGKTTIIN LLTRFYELQS GSITIDGTDI RRIGKEALRR KLGLVLQDTF LFSGTVLENI RFGQLNATDD ECIRAAELAE ADPFIRLLPQ GYNTVLSERA GNLSQGQRQL LAITRVILLN PDILILDEAT SSIDTRTELR IQKALLRLMA GRTSFVIVHR LSTIRDADLV LVIDNGTIVE QGTHQELLEH QGVYFNLYMS QFKGVAI
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