Gene Cpha266_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0838 
Symbol 
ID4570375 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp951556 
End bp953751 
Gene Length2196 bp 
Protein Length731 aa 
Translation table11 
GC content52% 
IMG OID639765436 
ProductRecD/TraA family helicase 
Protein accessionYP_911313 
Protein GI119356669 
COG category[L] Replication, recombination and repair 
COG ID[COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member 
TIGRFAM ID[TIGR01448] helicase, putative, RecD/TraA family 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGAAA AAACGACTCC CGCGCCAAAG CATGAAAGGA TTTCCGGCTC TGTCGAGCGG 
GTAACCTTTT ACAGCGAGGA GTCCGGATTC AGCGTTCTGA AGGTTCGGGT GAAAGGCAAC
CGCGACCTCG TATCGGTGGT GGGAACTTCA CCGGCAATCT CTCCCGGTGA GTTTGTAGAG
TGCCAGGGCA TATGGCATAA CGACCGGGTA CACGGGCTCC AGTTCAAGGC TGAGCACATC
ACGGTTATTC CGCCAACAAC CGCTTCAGGA ATCGAGAAAT ATCTTGCATC GGGGATGGTG
CGCGGTATTG GCGCTTTTTA TGCAAAAACG CTTGTCAGGG AGTTCGGCGC AAGAGTACTC
GATGTTATTG AAAACACCCC GGAAAAGTTA CTCGACATTC CCGGCATCGG AAAAAAACGC
CTCGACATTA TCACAAAATC GTGGGCCGAA CAAAAAGCCA TTCGCGACAT CATGGTTTTT
CTGCAGTCGC ACGGCGTTGG CGTAGCAAGA GCCTTCCGGA TATACAAGAC ATACAGGGAA
GATGCCATCC GCCTCGTAAC GGAAAATCCC TACCGCCTTT CGCTCGATAT CGAGGGAGTC
GGGTTTCTCA CCGCCGACAC CATAGCCGAT AAACTCGGCA TCTCTCAGGA CTCTCTGATC
AGGGCTGAAG CGGGCGTACG CCACATGTTG CAGGAACTTG CCACCGAAGG GCACTGTGCC
GTACCGGCAG AACGACTTAT TGCCGAATCG GCAGCCATGC TTGCTGTTGA AGTCGATATT
GTCACCGAGG CAGTAAAACA GCAGACAGAA AAAAAACATC TTTTGTGTGA AGAGATCGAC
GGCCGACAGT GCCTCTACAT TGCTCCGCTC TACCGCGCCG AACGGGGAGT TGCCTCAGGG
CTTCACCGCC TGATGGAGGG CCCCCTTCCA TGGAAAGAGG TCAATCCCGA TCAGAGCATT
GGTTCGGTTG AGCAAAAAAC AGGCCTGCTG CTCTCCCCTT CCCAGAAAGA GGCGGTGGCT
CTGGTACTGA AAAGCAAGGT TTCCGTCATA ACCGGCGGGC CCGGTGTGGG AAAAACAACG
CTGGTCAACG TTATTCTTTC CATTATCAGC TCCCTGAATG TGAAGGTCTC GCTTTGCGCT
CCAACCGGAC GCGCAGCAAA ACGCCTGTCG GAATCAACCG GACTTGAGGC AAAGACGATC
CACCGGCTGC TTGAATTTGA TCCGATACTG TTCAACTTCA AACGTGGCGA AGGCAACAAG
CTCGATACAA ACCTTGTTGT CGTGGATGAA ACATCGATGG TTGACGTGAT TCTCATGAAC
AAACTGCTTC TGGCCATTCC CGACAAAGCG GCACTGCTTC TGGTCGGGGA TGTCGATCAA
TTGCCCTCTG TCGGACCCGG CGCGGTGCTT TCGGATATCA TCACTTCAGG AGTTATACCA
ACAGTACGAT TGACAGAAAT CTTCCGGCAG GCTGCGGAAT CGAGCATTAT TATCAATGCG
CACCAGATCA ACCAGGGAAA AATACCGACG AATGCTGATG GCGATGCGCT GACCGACTTC
TACTTCATTG CATCGACAAC GCCAGAGGAT ATTCATAGAA AACTGCTCAC CATGGTCACA
GAACGCATTC CTAAACGATT CGGCTTTCAC CCTGTAAGAG ACATTCAGGT ACTGACGCCG
ATGAACCGGG GCGGACTTGG ATCACGCTCG CTCAATATCG AACTGCAACA GGCGCTCAAC
AAGGAGTCGA TGCCGCAGAT TAACCGGTTC GGAACGACAT TCTCGCCCGG CGACAAGGTT
ATCCAGATGG TAAACAACTA TGACAAGGAG ATTTTTAATG GCGATATCGG TCTTGTCGTA
TCAATAAATA CCGATGAAGG AGTCCTCTCT GTTGAATACG ACCGTCGGGT GATTACCTAT
GAGTTTTCGG AACTCGATGA AATAGCTCTT GCCTACGCCA CCAGCATCCA CAAAAGTCAG
GGATCAGAAT ACCCGGCTGT CGTCATACCG CTTGCCATGC AGCACTTCAC GCTGCTTGAA
AGAAATCTGC TCTACACAGC GGTAACACGA GGCAAAAAAC TCGTTGTCAT CATCGGTCAG
CCTAAAGCAC TTGCAACTGC TGTAGGGAAC CATAGAGCGA ACCAGCGCCT GACCAACCTT
TCGAGAAGGC TTGCTGAATG CACAGAAACC CCATGA
 
Protein sequence
MPEKTTPAPK HERISGSVER VTFYSEESGF SVLKVRVKGN RDLVSVVGTS PAISPGEFVE 
CQGIWHNDRV HGLQFKAEHI TVIPPTTASG IEKYLASGMV RGIGAFYAKT LVREFGARVL
DVIENTPEKL LDIPGIGKKR LDIITKSWAE QKAIRDIMVF LQSHGVGVAR AFRIYKTYRE
DAIRLVTENP YRLSLDIEGV GFLTADTIAD KLGISQDSLI RAEAGVRHML QELATEGHCA
VPAERLIAES AAMLAVEVDI VTEAVKQQTE KKHLLCEEID GRQCLYIAPL YRAERGVASG
LHRLMEGPLP WKEVNPDQSI GSVEQKTGLL LSPSQKEAVA LVLKSKVSVI TGGPGVGKTT
LVNVILSIIS SLNVKVSLCA PTGRAAKRLS ESTGLEAKTI HRLLEFDPIL FNFKRGEGNK
LDTNLVVVDE TSMVDVILMN KLLLAIPDKA ALLLVGDVDQ LPSVGPGAVL SDIITSGVIP
TVRLTEIFRQ AAESSIIINA HQINQGKIPT NADGDALTDF YFIASTTPED IHRKLLTMVT
ERIPKRFGFH PVRDIQVLTP MNRGGLGSRS LNIELQQALN KESMPQINRF GTTFSPGDKV
IQMVNNYDKE IFNGDIGLVV SINTDEGVLS VEYDRRVITY EFSELDEIAL AYATSIHKSQ
GSEYPAVVIP LAMQHFTLLE RNLLYTAVTR GKKLVVIIGQ PKALATAVGN HRANQRLTNL
SRRLAECTET P