Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0838 |
Symbol | |
ID | 4570375 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 951556 |
End bp | 953751 |
Gene Length | 2196 bp |
Protein Length | 731 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 639765436 |
Product | RecD/TraA family helicase |
Protein accession | YP_911313 |
Protein GI | 119356669 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGAAA AAACGACTCC CGCGCCAAAG CATGAAAGGA TTTCCGGCTC TGTCGAGCGG GTAACCTTTT ACAGCGAGGA GTCCGGATTC AGCGTTCTGA AGGTTCGGGT GAAAGGCAAC CGCGACCTCG TATCGGTGGT GGGAACTTCA CCGGCAATCT CTCCCGGTGA GTTTGTAGAG TGCCAGGGCA TATGGCATAA CGACCGGGTA CACGGGCTCC AGTTCAAGGC TGAGCACATC ACGGTTATTC CGCCAACAAC CGCTTCAGGA ATCGAGAAAT ATCTTGCATC GGGGATGGTG CGCGGTATTG GCGCTTTTTA TGCAAAAACG CTTGTCAGGG AGTTCGGCGC AAGAGTACTC GATGTTATTG AAAACACCCC GGAAAAGTTA CTCGACATTC CCGGCATCGG AAAAAAACGC CTCGACATTA TCACAAAATC GTGGGCCGAA CAAAAAGCCA TTCGCGACAT CATGGTTTTT CTGCAGTCGC ACGGCGTTGG CGTAGCAAGA GCCTTCCGGA TATACAAGAC ATACAGGGAA GATGCCATCC GCCTCGTAAC GGAAAATCCC TACCGCCTTT CGCTCGATAT CGAGGGAGTC GGGTTTCTCA CCGCCGACAC CATAGCCGAT AAACTCGGCA TCTCTCAGGA CTCTCTGATC AGGGCTGAAG CGGGCGTACG CCACATGTTG CAGGAACTTG CCACCGAAGG GCACTGTGCC GTACCGGCAG AACGACTTAT TGCCGAATCG GCAGCCATGC TTGCTGTTGA AGTCGATATT GTCACCGAGG CAGTAAAACA GCAGACAGAA AAAAAACATC TTTTGTGTGA AGAGATCGAC GGCCGACAGT GCCTCTACAT TGCTCCGCTC TACCGCGCCG AACGGGGAGT TGCCTCAGGG CTTCACCGCC TGATGGAGGG CCCCCTTCCA TGGAAAGAGG TCAATCCCGA TCAGAGCATT GGTTCGGTTG AGCAAAAAAC AGGCCTGCTG CTCTCCCCTT CCCAGAAAGA GGCGGTGGCT CTGGTACTGA AAAGCAAGGT TTCCGTCATA ACCGGCGGGC CCGGTGTGGG AAAAACAACG CTGGTCAACG TTATTCTTTC CATTATCAGC TCCCTGAATG TGAAGGTCTC GCTTTGCGCT CCAACCGGAC GCGCAGCAAA ACGCCTGTCG GAATCAACCG GACTTGAGGC AAAGACGATC CACCGGCTGC TTGAATTTGA TCCGATACTG TTCAACTTCA AACGTGGCGA AGGCAACAAG CTCGATACAA ACCTTGTTGT CGTGGATGAA ACATCGATGG TTGACGTGAT TCTCATGAAC AAACTGCTTC TGGCCATTCC CGACAAAGCG GCACTGCTTC TGGTCGGGGA TGTCGATCAA TTGCCCTCTG TCGGACCCGG CGCGGTGCTT TCGGATATCA TCACTTCAGG AGTTATACCA ACAGTACGAT TGACAGAAAT CTTCCGGCAG GCTGCGGAAT CGAGCATTAT TATCAATGCG CACCAGATCA ACCAGGGAAA AATACCGACG AATGCTGATG GCGATGCGCT GACCGACTTC TACTTCATTG CATCGACAAC GCCAGAGGAT ATTCATAGAA AACTGCTCAC CATGGTCACA GAACGCATTC CTAAACGATT CGGCTTTCAC CCTGTAAGAG ACATTCAGGT ACTGACGCCG ATGAACCGGG GCGGACTTGG ATCACGCTCG CTCAATATCG AACTGCAACA GGCGCTCAAC AAGGAGTCGA TGCCGCAGAT TAACCGGTTC GGAACGACAT TCTCGCCCGG CGACAAGGTT ATCCAGATGG TAAACAACTA TGACAAGGAG ATTTTTAATG GCGATATCGG TCTTGTCGTA TCAATAAATA CCGATGAAGG AGTCCTCTCT GTTGAATACG ACCGTCGGGT GATTACCTAT GAGTTTTCGG AACTCGATGA AATAGCTCTT GCCTACGCCA CCAGCATCCA CAAAAGTCAG GGATCAGAAT ACCCGGCTGT CGTCATACCG CTTGCCATGC AGCACTTCAC GCTGCTTGAA AGAAATCTGC TCTACACAGC GGTAACACGA GGCAAAAAAC TCGTTGTCAT CATCGGTCAG CCTAAAGCAC TTGCAACTGC TGTAGGGAAC CATAGAGCGA ACCAGCGCCT GACCAACCTT TCGAGAAGGC TTGCTGAATG CACAGAAACC CCATGA
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Protein sequence | MPEKTTPAPK HERISGSVER VTFYSEESGF SVLKVRVKGN RDLVSVVGTS PAISPGEFVE CQGIWHNDRV HGLQFKAEHI TVIPPTTASG IEKYLASGMV RGIGAFYAKT LVREFGARVL DVIENTPEKL LDIPGIGKKR LDIITKSWAE QKAIRDIMVF LQSHGVGVAR AFRIYKTYRE DAIRLVTENP YRLSLDIEGV GFLTADTIAD KLGISQDSLI RAEAGVRHML QELATEGHCA VPAERLIAES AAMLAVEVDI VTEAVKQQTE KKHLLCEEID GRQCLYIAPL YRAERGVASG LHRLMEGPLP WKEVNPDQSI GSVEQKTGLL LSPSQKEAVA LVLKSKVSVI TGGPGVGKTT LVNVILSIIS SLNVKVSLCA PTGRAAKRLS ESTGLEAKTI HRLLEFDPIL FNFKRGEGNK LDTNLVVVDE TSMVDVILMN KLLLAIPDKA ALLLVGDVDQ LPSVGPGAVL SDIITSGVIP TVRLTEIFRQ AAESSIIINA HQINQGKIPT NADGDALTDF YFIASTTPED IHRKLLTMVT ERIPKRFGFH PVRDIQVLTP MNRGGLGSRS LNIELQQALN KESMPQINRF GTTFSPGDKV IQMVNNYDKE IFNGDIGLVV SINTDEGVLS VEYDRRVITY EFSELDEIAL AYATSIHKSQ GSEYPAVVIP LAMQHFTLLE RNLLYTAVTR GKKLVVIIGQ PKALATAVGN HRANQRLTNL SRRLAECTET P
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