| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0708 |
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| Symbol | |
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| ID | 4569882 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | - |
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| Start bp | 807274 |
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| End bp | 808161 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639765306 |
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| Product | shikimate dehydrogenase |
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| Protein accession | YP_911187 |
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| Protein GI | 119356543 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0169] Shikimate 5-dehydrogenase |
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| TIGRFAM ID | [TIGR00507] shikimate 5-dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATGCAAC CAGAAAAAAT TCTCGGCCTT ATCGGGCGAA ATATAGCCTA CTCACGCTCA
CCCCTGATTC ATAATACAGC TTGCGATCTG CTCGCACTTC CCTATGTTTA CACGATTTTC
AACATCGCAT CTGCTGACCT TATCGAGCCG GCTATTGCAG GAGCAAGAGC TCTCGGCATA
GCCGGACTGA ACGTTACCAC TCCCTATAAA ACAACTGTTG TGCCTTTTCT TGACGAACTC
TCTCCTGAAG CCGCGTCAAT CGGAGCAGTC AACACCATCG TCAACAACAA CGGTCATCTT
GCCGGTTACA ATACCGATAT AGCCGGTTTT GCAGCACCCC TGCGCCCATA TGCCCAGCGC
ATCAAGGGAA ATCCGGTCTC TGTTTTCGGT AATGGCGGCG CGGCACTTGC CGCAATTGAA
GCATTCAGAA TTTTTTTTCA TCCCTGCTGC GTTTACCTGT TTGTCAGGGA CAGTGCCAAA
GCAAGCGCAA TGCTCGAAAA TTATGTTCAC AGAGATATCG TAACGCTCTG TTTGATTGAG
GAGCTTTTTT CCGGAGAGAG CGGTGCCATT GCAAAGATCC AGAGATCTCT TGTTATTGTA
AACGCAACAC CAATAGGCAC TGCCGGTCGT CAGAACGAAA CAGAAACAAG CATTTTACCT
CTTGACACGG AGTTACTGCA CCCTGATCAT ATCGTTTACG ATATGGTCTA CAATCCACTG
TTCACGCCGC TCATCAAGGC GGCAAAAGCC AGCGGCGCTG CAACCATTTC AGGAATCGAG
ATGCTGCTTG GACAAGCTGC GCGATCATTT GAACTCTGGA CAGGAAAAGA AATGCCACTT
GAGCAAGTCA GAGCTGTTCT GATAAATAAT CTGCTCTCCT CTCCATAA
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| Protein sequence | MMQPEKILGL IGRNIAYSRS PLIHNTACDL LALPYVYTIF NIASADLIEP AIAGARALGI
AGLNVTTPYK TTVVPFLDEL SPEAASIGAV NTIVNNNGHL AGYNTDIAGF AAPLRPYAQR
IKGNPVSVFG NGGAALAAIE AFRIFFHPCC VYLFVRDSAK ASAMLENYVH RDIVTLCLIE
ELFSGESGAI AKIQRSLVIV NATPIGTAGR QNETETSILP LDTELLHPDH IVYDMVYNPL
FTPLIKAAKA SGAATISGIE MLLGQAARSF ELWTGKEMPL EQVRAVLINN LLSSP
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