Gene Cpha266_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0620 
Symbol 
ID4569331 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp695421 
End bp696728 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content48% 
IMG OID639765217 
Productouter membrane efflux protein 
Protein accessionYP_911099 
Protein GI119356455 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1538] Outer membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value1.93694e-05 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTTCCAT CTACAGCAGC GAATAAAAAG CGAAGGGGTG TGTTTGAGTT TTGCGGTGTT 
ATTCTACTGG TGTGTTTTTT TACTTCAGGA TCTGCTTTTG CAGAAGAGAT GCTTACCTGG
CAGCAGTGTA TCAATGAGGC AAGAAAAGCC CACCCCGATC TTTACGCAGC CCAGGCGCTT
ATGCAGCAGA CCGATGCCGA TGAACGTATA GCAGCGAGCG CACGCTCTCC ACAGCTCAGT
CTGAGTGTCA GCTCCCAGGA AAGCTTTATG ACAGCAAAAA ACAACGGGAG CCGCTTATCT
TCGGCTCATT CCTATTCTCT CTCGGCACAG CAGCTTCTTT ATGACGGCAA TAAAACTTCC
AGTCAGATCG CAAGCGCTAA AGAGGCTGTC AAAGGCGCGC AAAACAATTA TAACGTTGTT
GCCGCTGATC TCCGTTTTGC TCTGCGAACG GCATTTACGC AATTGCTTAA AGCTCAGGAG
CTTGTCGGAC TTGCAGGCGA AATTGCCGAA AGACGTCAGA ATAATGTTCG TTTGATCAGC
TTGCGATACC GTGGAGGGCG GGAGCACCTT GGGTCGCTTC GCCAGTCTGA GGCCGATCTT
GCTGAGGCGG AGTTTGATGT TTCGCAAGCA AAACGTGGCC TTGTATTGGC CCAGACACTC
CTTGCTTCAG CGCTTGGGCG TGATACCCAT AAACCGCTCA GGGTTCAGGG GGCATTCAAG
GTTGCTGATC TTTCGGTCAC AAAACCTGAT CTTGCACTTC TCGTAAAGAA TAACCCGCTT
TTTCAGCAGC TCGATACAAA AAGTAAAGCG GCTCGTTTTG ATCTTGATGC AGCCAGAAGT
GCATTTTCTC CTGAGCTCTA CCTGACATCC TCAATCGGAA ACGGTTCGGT TGACAGCTTG
CCGTTCAATA ATCTGGATGC GAACGCAGGC TTCACGGTTT CCGTCCCGAT ATATGAAGGA
GGAGCGGGCA GAGTAAGGGT TATAAAAGCA ATGGCGGTGT TGAGTCAGCA TAATGCAGAG
GAAAAAAGCG GCTATCTTCA GCTTTTCAAT GCCCTCGAAG AGAGTTGGAA AAGTTATCAG
GATGCCCGTC AGATGGTTGT GGTGAAGAGA AAATTTCTTG ATGCTGCTCT TGAACGTTCA
ACCATTGCCA ACGCGCAATA TTCGAATGGC TTGATTTCTT TCGACGATTG GGTGATTATT
GAAAACAATC TTGTGAGTGC AAAGAAGGAG TTTCTCAATG CCGGAGCAGA TATGCTGATT
GCCGAGGCTC AATGGATTCA GGCAAAAGGA GAAGGATTTG ATGGTTAA
 
Protein sequence
MVPSTAANKK RRGVFEFCGV ILLVCFFTSG SAFAEEMLTW QQCINEARKA HPDLYAAQAL 
MQQTDADERI AASARSPQLS LSVSSQESFM TAKNNGSRLS SAHSYSLSAQ QLLYDGNKTS
SQIASAKEAV KGAQNNYNVV AADLRFALRT AFTQLLKAQE LVGLAGEIAE RRQNNVRLIS
LRYRGGREHL GSLRQSEADL AEAEFDVSQA KRGLVLAQTL LASALGRDTH KPLRVQGAFK
VADLSVTKPD LALLVKNNPL FQQLDTKSKA ARFDLDAARS AFSPELYLTS SIGNGSVDSL
PFNNLDANAG FTVSVPIYEG GAGRVRVIKA MAVLSQHNAE EKSGYLQLFN ALEESWKSYQ
DARQMVVVKR KFLDAALERS TIANAQYSNG LISFDDWVII ENNLVSAKKE FLNAGADMLI
AEAQWIQAKG EGFDG