Gene Cpha266_0601 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0601 
SymbolglyA 
ID4568721 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp673670 
End bp674992 
Gene Length1323 bp 
Protein Length440 aa 
Translation table11 
GC content50% 
IMG OID639765199 
Productserine hydroxymethyltransferase 
Protein accessionYP_911081 
Protein GI119356437 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0112] Glycine/serine hydroxymethyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACCG ATATCCTTCA GATGCAGGAT AAAGAAGTTT TTGAAGCGGT GGTCAACGAG 
ACGGTAAGGC AGACCGAAAC GCTGGAACTT ATCGCTTCCG AGAATTTTAC CAGTCGTGCG
GTTATGCAGG CATGCGGCTC GGTGATGACC AACAAATACG CCGAGGGCTA TCCCGGAAAG
AGGTATTACG GCGGGTGCGA ATTTGTTGAT GTTGCCGAAA ACCTTGCGCG TGATCGGGCA
AAAAAACTCT TTAACTGTTC ATATGTCAAC GTGCAGCCGC ATTCCGGCTC AAGTGCCAAT
ATGGCAGTAC TGTTCTCGGT ACTCAAGCCT GGTGACCGGA TCATGGGTCT TGATCTGTCT
CACGGCGGTC ATCTTACCCA TGGCAGTCCG GTGAACTTTT CGGGTCAACT TTATGAGGCT
CACTCATATG GTGTTCGGAG AGAAACCGGC TGTATTGACA TGAATATGGT TGAGGAACTG
GCTAATAAGG TTCGTCCGAA ACTTATCATC TGCGGTGCAA GCGCCTATTC TCAGGGATTC
GATTTCAAGG CTTTCAGGGA GATTGCCGAT AGGATCGGTG CTCTGCTCAT GGCTGATATT
GCGCATCCGG CAGGACTTAT TGTCGCAGGG CTTTTAAGCG ATCCTGTTCC GCATTGTCAT
TTTGTGACCA CAACCACACA CAAGACGCTT CGCGGACCAA GGGGCGGAAT GATCATGATG
GGCAGTGATT TTGAGAATCC ACTCGGGATT ACCATCAAAA CAAAAACCGG CTCACGGGTG
AAAATGATGA CGGAGGTAAT GGATGCAGAG GTTATGCCCG GCATTCAGGG CGGCCCGCTG
ATGCATATTA TTGCAGGAAA GGCAGTTGCA TTTGCTGAGG CGCTTCGCCC GGAGTTCAGG
GATTATGCGC TGCAGGTAAA AAAGAATGCT GCCGTTATGG CGGATAAATT TTCGAGTCTC
GGTTACACCA TTGTCAGCGG TGGCACCAAG AACCATCTCA TGCTGCTTGA CTTGCGCAAC
AAGAACGTAA ATGGAAAGGT TGCTGAAAAT CTGTTGCATC AAGCAGGTAT TACCGTTAAC
AAGAATATGG TACCGTTCGA CGACAAGTCT CCCTTTGTTA CCAGCGGAAT CAGAATCGGG
ACTCCGGCAA TGACGACCAG AGGGATGAAA GAGAGCGACA GCGAGCGTAT CGTCGAGTTG
ATCGATCGTG TTGTTTCCGC GGCTGAAACT CCTGCTGTTG ATGATGTGTG TCGTTTGGTG
CGTCAGGAAA TCAGGGAGCT CTGTCTTCAG CACCCGATGG ATGGATATGA GATGACGCCA
TAA
 
Protein sequence
MDTDILQMQD KEVFEAVVNE TVRQTETLEL IASENFTSRA VMQACGSVMT NKYAEGYPGK 
RYYGGCEFVD VAENLARDRA KKLFNCSYVN VQPHSGSSAN MAVLFSVLKP GDRIMGLDLS
HGGHLTHGSP VNFSGQLYEA HSYGVRRETG CIDMNMVEEL ANKVRPKLII CGASAYSQGF
DFKAFREIAD RIGALLMADI AHPAGLIVAG LLSDPVPHCH FVTTTTHKTL RGPRGGMIMM
GSDFENPLGI TIKTKTGSRV KMMTEVMDAE VMPGIQGGPL MHIIAGKAVA FAEALRPEFR
DYALQVKKNA AVMADKFSSL GYTIVSGGTK NHLMLLDLRN KNVNGKVAEN LLHQAGITVN
KNMVPFDDKS PFVTSGIRIG TPAMTTRGMK ESDSERIVEL IDRVVSAAET PAVDDVCRLV
RQEIRELCLQ HPMDGYEMTP