Gene Cpha266_0541 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0541 
Symbol 
ID4569078 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp595389 
End bp596792 
Gene Length1404 bp 
Protein Length467 aa 
Translation table11 
GC content49% 
IMG OID639765140 
Productbifunctional UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase/(3R)-hydroxymyristoyl-[acyl-carrier-protein] dehydratase 
Protein accessionYP_911022 
Protein GI119356378 
COG category[M] Cell wall/membrane/envelope biogenesis
[I] Lipid transport and metabolism 
COG ID[COG0764] 3-hydroxymyristoyl/3-hydroxydecanoyl-(acyl carrier protein) dehydratases
[COG0774] UDP-3-O-acyl-N-acetylglucosamine deacetylase 
TIGRFAM ID[TIGR00325] UDP-3-0-acyl N-acetylglucosamine deacetylase
[TIGR01750] beta-hydroxyacyl-[acyl carrier protein] dehydratase FabZ 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00572475 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATTC ATCAGCGTAC ACTTCAAAAA GAGGTCTCTC TGCGGGGTAC CGGCCTGCAT 
ACCGGAAAGG AATGCAGAAT CACCTTTAAA CCTGCTCCGG TAAACTACGG GTACCGCTTT
ATCCGTTCCG ATATTGAAAA CAGTCCGGAA ATACCCGCAC TTATCGACAA TGTAGTCGAC
GTGCTTCGTG GAACAACCAT CGGTATCAAC GGCGTCAATG TCCACACCAC CGAACATGTG
CTCGCAGCGC TCTACGGCCT TCAGATTGAT AACTGCTCGA TCGAAATGAG CGGCCCCGAA
CCCCCCGTAA TGGATGGCAG CTCCCTGCCG TTTGCCGAAG CTCTGCTCAG TGCAGGCATT
GCAAAACAGG ATGAGCCGAA AAATTATCTT GTCATTGATG AAACCGTCGA GTTCCATGAC
ACAGTCAACA CCGTTGATAT CGTTGCCCTC CCGCTCGACA GCTTCAGGGT CACCGTGATG
GTGGATTACA AAAACCCGGC GCTCGGATCA CAGCACTCGG GGCTGTTTGA CCTTGAAAAA
GAGTTTCTCA AAGATTTTGC GCCATCAAGA ACATTCTGTT TTCTGAGTGA AGTCGAAACC
CTTGCAAACC AGGGCATTAT CAAAGGAGGC GATATCGATA ACGCCGTTGT CATTGTCGAT
AAATCCATGA ACAACGAGGA ACTGCAAAGC CTTGCAGGAA AACTCGATCT TGAGCATGAT
CATCTTGCCA TAGGTGAAAA CGGCATTCTC AACAACAGAG CGTTACGGTT CCAGAACGAA
CCTGCCCGTC ATAAACTTCT TGACCTGCTC GGCGATATCG CCCTGCTCGG CATGCCTTTA
AGAGCGCAGG TTCTTGCCGC GCGTCCCGGT CACGCATCAA ATGTTGAATT TGTCAAGCAA
CTGAAAAAAT ACGCAGACCG CAACAAACTT GCCCGGCAAT ACCAGCACGA AAAAAAGGCA
GGCGTCATTT TTGACATCAA CGCCATTCAG AACATTCTGC CTCATCGTTA TCCATTTCTC
CTGATCGACA AGATTGTTGA GTTCAAGCTT GATGAGAAAA TCGTCTCCAT CAAGAACGTG
ACCATGAACG AACCATTCTT TCAGGGCCAC TTTCCAGGAA ATCCCGTTAT GCCCGGCGTG
CTGATCATCG AAGCCATGGC TCAGACCGGA GGCATCATGA TGCTTAACGG AACCGAAAAT
ATTCAGGAAA TGCTTGTGTA TTTCATGGGC ATTGACAAAG CCCGATTCCG CAAACCGGTT
TTACCGGGAG ATACGCTCGT TATCGAAGCG GTAATGACCA ACAAGCGAAG AAGCGTATGT
CAGTTCGACG CAAAAGCATA TGTCCGCGGT GAACTTGTTT GTGAAGCGTC ACTTATGGCA
ACGGTAATGC CGAAAACAAA GTAA
 
Protein sequence
MLIHQRTLQK EVSLRGTGLH TGKECRITFK PAPVNYGYRF IRSDIENSPE IPALIDNVVD 
VLRGTTIGIN GVNVHTTEHV LAALYGLQID NCSIEMSGPE PPVMDGSSLP FAEALLSAGI
AKQDEPKNYL VIDETVEFHD TVNTVDIVAL PLDSFRVTVM VDYKNPALGS QHSGLFDLEK
EFLKDFAPSR TFCFLSEVET LANQGIIKGG DIDNAVVIVD KSMNNEELQS LAGKLDLEHD
HLAIGENGIL NNRALRFQNE PARHKLLDLL GDIALLGMPL RAQVLAARPG HASNVEFVKQ
LKKYADRNKL ARQYQHEKKA GVIFDINAIQ NILPHRYPFL LIDKIVEFKL DEKIVSIKNV
TMNEPFFQGH FPGNPVMPGV LIIEAMAQTG GIMMLNGTEN IQEMLVYFMG IDKARFRKPV
LPGDTLVIEA VMTNKRRSVC QFDAKAYVRG ELVCEASLMA TVMPKTK