| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0494 |
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| Symbol | |
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| ID | 4569264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Chlorobium phaeobacteroides DSM 266 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008639 |
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| Strand | + |
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| Start bp | 540958 |
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| End bp | 541689 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639765093 |
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| Product | ribosomal large subunit pseudouridine synthase B |
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| Protein accession | YP_910975 |
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| Protein GI | 119356331 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAAAGAAA CGGAAGATGA GGGCGGGATA CGAATCAACA GGTATCTTGC CATGTGCGGT
ATAGCTTCAA GACGGGCGGC CGACAAGCTT GTTGCTGATG GTCGTGTGAC GGTTAACGGC
AAAATTGCAG ATGAACCGGG ATTAAGGATT CTGCCGTTCA AGGACGAGGT TATTGTCGAC
GGGCGAAAAT TTGTCGTGCC GGAAGCAAAA AAGGTCTATA TCCTGCTCAA TAAACCGAGA
AATGTTATTA CCACCAGTCA TGACGAGAAA GATCGTGAAA CGATTCTTGA TCTTGTATCC
GTCGAGGAGC GGGTCTATCC GGTAGGTCGG CTTGACAGGA AAACCACCGG CGTTATTCTT
TTGACCAATG ACGGAATTCT TGCTCATCGC CTGATGCACC CGTCATCCAA TGTTAAAAAA
GAGTATGTTG CCGAGCTGGA CAAACGCTTC CCCCAGGGGC TTCTTTCGCA GCTTGTCGGA
GGGATGAAGC TGAAGGATAC CGGTGAAAAG GTGAGTCCCT GTCAGGCAAA ACTCCTTGAC
GATGGCATGA GGATCTGGAT CAGCATTCAT GAAGGAAAAA ATCACCAGGT GAGAAGAATG
CTTGAAACGC TTGGTTTCGA TGTAACAAAA CTTGAACGGG TCGCCTACGC TGGTCTGAAA
GCCGGAGACC TCCGGCGTGG AGCCTGGCGC CACCTGAGCA AGAACGAAGT TCGGGAGTTG
TATCGATTGT AG
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| Protein sequence | MKETEDEGGI RINRYLAMCG IASRRAADKL VADGRVTVNG KIADEPGLRI LPFKDEVIVD
GRKFVVPEAK KVYILLNKPR NVITTSHDEK DRETILDLVS VEERVYPVGR LDRKTTGVIL
LTNDGILAHR LMHPSSNVKK EYVAELDKRF PQGLLSQLVG GMKLKDTGEK VSPCQAKLLD
DGMRIWISIH EGKNHQVRRM LETLGFDVTK LERVAYAGLK AGDLRRGAWR HLSKNEVREL
YRL
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