Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0488 |
Symbol | |
ID | 4569258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | - |
Start bp | 535856 |
End bp | 536260 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 639765087 |
Product | CopG family transcriptional regulator |
Protein accession | YP_910969 |
Protein GI | 119356325 |
COG category | [K] Transcription |
COG ID | [COG0864] Predicted transcriptional regulators containing the CopG/Arc/MetJ DNA-binding domain and a metal-binding domain |
TIGRFAM ID | [TIGR02793] nickel-responsive transcriptional regulator NikR |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.632627 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTGAGA TATACCGTTT CGGCGTATCC CTCGACAAGT CCCTGATCGA AGCATTTGAC AGGCATATCC AGTCAAGGCA CTATCATAAC AGATCCGAAG CGCTGCGCGA CCTGATCAGG GAAGAACTTG TCAGAAAAAA ATGGACGGAA GGCGGAACCG TTGCAGGAGC AGTCATCATG ACCTATGACC ATCACAAGCG TGAGCTGGTC AACAGACTGC TTGACATTCA GCATGACTTT CAGAAAACCA TCATTGCGTC ATCACATGTT CACCTCGACC ATGACCACTG CCTTGAAGTC ATTGCCGTCA AAGGTAACGC TGCCGATGTT GAACAGCTTT CGCTGAAACT GAAATCGCTT GTAGGAGTTA AACATCTGAG CCTCAGCATC TCTTCGGCAG AGTGA
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Protein sequence | MSEIYRFGVS LDKSLIEAFD RHIQSRHYHN RSEALRDLIR EELVRKKWTE GGTVAGAVIM TYDHHKRELV NRLLDIQHDF QKTIIASSHV HLDHDHCLEV IAVKGNAADV EQLSLKLKSL VGVKHLSLSI SSAE
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