Gene Cpha266_0480 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0480 
Symbol 
ID4568524 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp528519 
End bp529610 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content50% 
IMG OID639765079 
ProductRND family efflux transporter MFP subunit 
Protein accessionYP_910961 
Protein GI119356317 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0845] Membrane-fusion protein 
TIGRFAM ID[TIGR01730] RND family efflux transporter, MFP subunit 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGACTT TACAGAAAGT TCTTCCCAAG TATACTATAG CTCTTGCCCT TGTTTTTTTT 
GTTACCGTAG CCTATCTCCT GACCCGTGGC AATACGGTAG ACGTTGAGGC TGGTGAGGTT
ACATATGCCG AACTGGTTCA GGCTATTTAT GCCACCGGTT TTGTCGAGGC GGAAGCCGTG
GCCAATCTCA GTTCCGAACT TTCAGGAACG GTGAATTATA TCGGCGCTCT TGAGGGCCAG
CAGGTTACCG CCGGCCAGAC TATTATTTCG CTTGATAACG CGCAGCCAGG TATCTCGGTT
CGTGAGGCGC AGGCGGCTTT TCTTGAGCAG CAGGCGGTGA ATCAGGAGAA AACGATGAAA
TACAGCCGTG CCAGGAACCT GTTCAGGGAA GGCGCCCTCG CGCGTCAGGA TCTTGATGAA
GCCAAAAGGA TCAGTTCACA GGCGGAAGAG CTGCTCGAAC AGAAGCGCCT GCAATTGAAA
AGCAGGGAGG ATGAGCTGAA AAAAATAGCA ATAACAGCTC CTTTTGCAGG TGTTCTTACG
TTGCAGAGTG TGAAAAAAGG CGATTATGTT ACCGCAAACA TGCTTGTCGC AAGGGTTGTT
GACACGTCAA AGTATGTGGT GAGCGTTGAG ATTGATGAGC TTGACGTTCC CCGGATTCGT
CCCGGACAGG CTGCGGTCGT TGTGCTTGAT GCCCTGCCGA CTGAACGGTA TGATGCCGTT
GTGTCGAGGA TTGTGCCTCA GACCGACACC ATCACCAAAA CATCAAGGGT CTATCTCACG
TTTCGGAAGG CCGTAACCGG TATCCAGGCT GGAATGACCA TAACGGCTAA TATCGTATAC
CACATTAAAC CGCATACGCT GCTGGTGCGT AAAAGTTCGG TTTTTGATGA TAACCACAAG
AGTTATGTCT GGGAAATCGA GAAAGGAAAA CTGAAAAAAC AGTTGATTGT AACCGGAGCC
AGCGATTTGA CCTTTGTTGA GGTTCTCAGT GGTCTTCAGC AAGGCGACAG GGTTGCCCTG
CTTCCCGAAG AGCGCTTTCG AGAGGGAATG GATGCAAACG TTCTGGTCGC AAAAGCCGGG
AAGGCGGAGT GA
 
Protein sequence
MQTLQKVLPK YTIALALVFF VTVAYLLTRG NTVDVEAGEV TYAELVQAIY ATGFVEAEAV 
ANLSSELSGT VNYIGALEGQ QVTAGQTIIS LDNAQPGISV REAQAAFLEQ QAVNQEKTMK
YSRARNLFRE GALARQDLDE AKRISSQAEE LLEQKRLQLK SREDELKKIA ITAPFAGVLT
LQSVKKGDYV TANMLVARVV DTSKYVVSVE IDELDVPRIR PGQAAVVVLD ALPTERYDAV
VSRIVPQTDT ITKTSRVYLT FRKAVTGIQA GMTITANIVY HIKPHTLLVR KSSVFDDNHK
SYVWEIEKGK LKKQLIVTGA SDLTFVEVLS GLQQGDRVAL LPEERFREGM DANVLVAKAG
KAE