Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0480 |
Symbol | |
ID | 4568524 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 528519 |
End bp | 529610 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639765079 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_910961 |
Protein GI | 119356317 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0845] Membrane-fusion protein |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGACTT TACAGAAAGT TCTTCCCAAG TATACTATAG CTCTTGCCCT TGTTTTTTTT GTTACCGTAG CCTATCTCCT GACCCGTGGC AATACGGTAG ACGTTGAGGC TGGTGAGGTT ACATATGCCG AACTGGTTCA GGCTATTTAT GCCACCGGTT TTGTCGAGGC GGAAGCCGTG GCCAATCTCA GTTCCGAACT TTCAGGAACG GTGAATTATA TCGGCGCTCT TGAGGGCCAG CAGGTTACCG CCGGCCAGAC TATTATTTCG CTTGATAACG CGCAGCCAGG TATCTCGGTT CGTGAGGCGC AGGCGGCTTT TCTTGAGCAG CAGGCGGTGA ATCAGGAGAA AACGATGAAA TACAGCCGTG CCAGGAACCT GTTCAGGGAA GGCGCCCTCG CGCGTCAGGA TCTTGATGAA GCCAAAAGGA TCAGTTCACA GGCGGAAGAG CTGCTCGAAC AGAAGCGCCT GCAATTGAAA AGCAGGGAGG ATGAGCTGAA AAAAATAGCA ATAACAGCTC CTTTTGCAGG TGTTCTTACG TTGCAGAGTG TGAAAAAAGG CGATTATGTT ACCGCAAACA TGCTTGTCGC AAGGGTTGTT GACACGTCAA AGTATGTGGT GAGCGTTGAG ATTGATGAGC TTGACGTTCC CCGGATTCGT CCCGGACAGG CTGCGGTCGT TGTGCTTGAT GCCCTGCCGA CTGAACGGTA TGATGCCGTT GTGTCGAGGA TTGTGCCTCA GACCGACACC ATCACCAAAA CATCAAGGGT CTATCTCACG TTTCGGAAGG CCGTAACCGG TATCCAGGCT GGAATGACCA TAACGGCTAA TATCGTATAC CACATTAAAC CGCATACGCT GCTGGTGCGT AAAAGTTCGG TTTTTGATGA TAACCACAAG AGTTATGTCT GGGAAATCGA GAAAGGAAAA CTGAAAAAAC AGTTGATTGT AACCGGAGCC AGCGATTTGA CCTTTGTTGA GGTTCTCAGT GGTCTTCAGC AAGGCGACAG GGTTGCCCTG CTTCCCGAAG AGCGCTTTCG AGAGGGAATG GATGCAAACG TTCTGGTCGC AAAAGCCGGG AAGGCGGAGT GA
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Protein sequence | MQTLQKVLPK YTIALALVFF VTVAYLLTRG NTVDVEAGEV TYAELVQAIY ATGFVEAEAV ANLSSELSGT VNYIGALEGQ QVTAGQTIIS LDNAQPGISV REAQAAFLEQ QAVNQEKTMK YSRARNLFRE GALARQDLDE AKRISSQAEE LLEQKRLQLK SREDELKKIA ITAPFAGVLT LQSVKKGDYV TANMLVARVV DTSKYVVSVE IDELDVPRIR PGQAAVVVLD ALPTERYDAV VSRIVPQTDT ITKTSRVYLT FRKAVTGIQA GMTITANIVY HIKPHTLLVR KSSVFDDNHK SYVWEIEKGK LKKQLIVTGA SDLTFVEVLS GLQQGDRVAL LPEERFREGM DANVLVAKAG KAE
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