Gene Cpha266_0473 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0473 
Symbol 
ID4568517 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp521449 
End bp522165 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content50% 
IMG OID639765072 
ProductABC transporter related 
Protein accessionYP_910954 
Protein GI119356310 
COG category[V] Defense mechanisms 
COG ID[COG1136] ABC-type antimicrobial peptide transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGTACAA CGATGTTCAG ACTTGAACAT ATCCGAAGGG AGCTTGCTCT GTCACGGGAT 
GTCCGTCAGA CCATCATTCC CGATCTCTCC CTTGAAATCG AGGCAGGAGA GTTTGTCGCT
ATTACCGGGC CCTCCGGTTC AGGTAAATCG ACGCTTCTCT ATATGATGGG AGGGCTTGAC
AAGCCTACGT TCGGTAATGT CTGGCTGGAT GGCGAGGAGC TTACCGAAAA GGATGAGTCA
GAGATGAACC GGATTCGAAA CGAAAAGATC GGGTTTATCT ATCAGTTTCA TTTTCTTCTT
CCCGAGTTTA CCGCATTGGA AAATGTCAGT ATGCCGATGA TGATCAATGG GCGCTTCAAT
AAAAAAGAGA TCAAGGATCG GGCAAAGATG CTGCTTGATA CGGTTGGTCT CGAGAACAAG
TATACCAACA AGCCGAGCCA GCTTTCCGGA GGCCAGCAGC AGAGGGTTGC AATTGCCCGC
GCACTTGCAA ATGAACCGAA GGTGCTTCTT GGCGATGAGC CTACCGGCAA TCTGGATTCG
AAATCGGCAA AAAATGTCTA TGAGCTTTTT GACCGGTTGA ATCAGGAAAA AAATCAGACG
ATCGTGGTGG TAACCCATGA TGAGGATTTT GCCAACCGGG CTGGACGGAG AATTCATCTG
GTGGACGGTA TGATCGAGAG CGACAGCCCG CTCCGGGTTA TGGCTGGGCG TTCTTGA
 
Protein sequence
MGTTMFRLEH IRRELALSRD VRQTIIPDLS LEIEAGEFVA ITGPSGSGKS TLLYMMGGLD 
KPTFGNVWLD GEELTEKDES EMNRIRNEKI GFIYQFHFLL PEFTALENVS MPMMINGRFN
KKEIKDRAKM LLDTVGLENK YTNKPSQLSG GQQQRVAIAR ALANEPKVLL GDEPTGNLDS
KSAKNVYELF DRLNQEKNQT IVVVTHDEDF ANRAGRRIHL VDGMIESDSP LRVMAGRS