Gene Cpha266_0387 details

Gene Information

• Locus tag: Cpha266_0387
• ID: 4568980
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium phaeobacteroides DSM 266
• Kingdom: Bacteria
• Replicon accession: NC_008639
• Strand: -
• Start bp: 427866
• End bp: 429725
• Gene Length: 1860 bp
• Protein Length: 619 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 639764985
• Product: ABC transporter related
• Protein accession: YP_910870
• Protein GI: 119356226
• COG category: [V] Defense mechanisms
• COG ID: [COG1132] ABC-type multidrug transport system, ATPase and permease components

Plasmid Coverage information

• Num covering plasmid clones: 8
• Plasmid unclonability p-value: 0.102241
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGAATCGAC AAAAAGAACA AACAACCGAT ACGTCTGCAC AAGAACAAAC GAGCAAACGT 
TCTGTCTCTG CAAAAAGCTT CAGAACGCAA AAGGATGAGA CCCTTGAAAA AGGGAAAAAA 
GGATCGGCGG ACTGGTATAT TGCCTCGCGC CTTATTGCTT ATATCAAACC CTATAAAGCA 
CTCGTAGCCG CATCTGCCGG AATCACGCTC GCCGGGTCAA TTCTGGGCCC CCTGAGACCT 
TATCTCACAA AAATCGCCAT TGACGACTAC ATCGCCCATG GCGATATGAA AGGGCTTGCA 
ACCATCAGCC TGCTTCTTGC TGCGGTTGTC CTGCTCGACG GCATAAAACA GTTTATTGCA 
ACATGGCTTA CCCAGATCAT CGGCCAGAAA GCCGTCTTCA GCATCCGAAT GGATGTTTTC 
AGACATCTGC AACAACTTCC GGCAAGGTTT TTTGACCGCA ATCCCATAGG CCGACTCCTG 
ACCCGTACCA CCAATGACAT CGAATCGCTC AACGAGATGC TCTCAAGCGG GATCATTACC 
ATTCTCGGCG ACATCATGCA GCTCCTGTTC ATTGTCGGCC TGATGCTCTG GATAGACTGG 
CAACTCGCCC TTGTGGTGCT CGCCATTCTG CCCCTGATGC TCTACGCCAC CATGATGTTC 
AAAAAAAGAG TGCGGATCGC CTTTCAGGAT GTTCGCACCC ATCTTGCCCG ACTCAACACC 
TTTTTACAGG AACATATCGC CGGCATGACC ATTGTGCAGC TCTTCAATCA TCAAAAAAGC 
GAATACACCA AACATTCGGA CATCAATGCC GATCACAGGG ATGCAAATAT CAGAACCGTT 
TTTTATTTTT CGGTTTACTA TCCGTTCATC GAAGTCCTGA GTTCGCTTAC CGCAGGAATG 
GTCATCTGGT ACAGCGCGGT AAGGGTTCTC AATGCTGATC TCACCCTGGG AGTAGTCGTC 
TCCTTTGTGC AGTACATCTG GTTGTTTTTC AGACCGCTAC AGCATCTTTC AGACAGGTTC 
AACGTCATAC AAACCGCCAT TGCAAGCTCC GACAGGGTTT TTCGCCTGCT CGAGGAAAAG 
GGCGGAGAAG GTGATGCCGG AGCAGAACCG GAACCATTCG TCTTCAGAAG TCGAATCACT 
TTCAGCAACG TCTGGTTTGC ATATGATACT GACAACTGGA TACTCAAGGA TCTTTCGATG 
GAAGTCCGGC GTGGAGAAAA AATCGCCATA GTCGGGGCAA CAGGAAGCGG AAAAACAACC 
ATCATCAATA TACTCTCCCG TCTCTATCCA TACGCAAAAG GATCGATCCG CATTGACAAT 
GTTGAACTCC CCGACATAGC GAGCCGCTCG CTGAGAAAAA TGATCGGCGT TGTCATGCAG 
GATGTCTTTT TGTTTTCAGG CACCATACGC GAAAACCTTG CATTCGGAAA TCCGGACTTG 
CCCGACGAAG CCATTTTCGA AGCGGCTCGA ATTGTCGGTG CTGACCGATT TATCGATCAA 
CTGCCTGGCG GTTATGCCTA CAGGGTTCAG GAAAACGGCG CGGGGCTCTC TGCCGGTCAG 
AAACAATTAA TAGCGTTTGT TCGGGCTCTG CTTTACGACC CACAGATACT TGTGCTTGAC 
GAAGCAACCA GTTCAGTTGA TACCGAAACA GAGATGCTTA TCGATGCGGC AACAGCCAAA 
CTCATGCAGA ACAGAACATC AATCATCATA GCCCATCGCC TCTCAACCGT TCAGAAAGCT 
GACAGAATTA TCGTCCTGCA CAAAGGGGTG ATCAAGGAGA GCGGCAGCCA CCAGGAACTG 
CTCAAGGAAA AAGGGCTCTA CTACAAGCTC TACCTCTTGC AGCACCCGGA GGGGAGGTAA 

 

Protein sequence

MNRQKEQTTD TSAQEQTSKR SVSAKSFRTQ KDETLEKGKK GSADWYIASR LIAYIKPYKA 
LVAASAGITL AGSILGPLRP YLTKIAIDDY IAHGDMKGLA TISLLLAAVV LLDGIKQFIA 
TWLTQIIGQK AVFSIRMDVF RHLQQLPARF FDRNPIGRLL TRTTNDIESL NEMLSSGIIT 
ILGDIMQLLF IVGLMLWIDW QLALVVLAIL PLMLYATMMF KKRVRIAFQD VRTHLARLNT 
FLQEHIAGMT IVQLFNHQKS EYTKHSDINA DHRDANIRTV FYFSVYYPFI EVLSSLTAGM 
VIWYSAVRVL NADLTLGVVV SFVQYIWLFF RPLQHLSDRF NVIQTAIASS DRVFRLLEEK 
GGEGDAGAEP EPFVFRSRIT FSNVWFAYDT DNWILKDLSM EVRRGEKIAI VGATGSGKTT 
IINILSRLYP YAKGSIRIDN VELPDIASRS LRKMIGVVMQ DVFLFSGTIR ENLAFGNPDL 
PDEAIFEAAR IVGADRFIDQ LPGGYAYRVQ ENGAGLSAGQ KQLIAFVRAL LYDPQILVLD 
EATSSVDTET EMLIDAATAK LMQNRTSIII AHRLSTVQKA DRIIVLHKGV IKESGSHQEL 
LKEKGLYYKL YLLQHPEGR