| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0219 |
|---|
| Symbol | |
|---|
| ID | 4570706 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | + |
|---|
| Start bp | 241814 |
|---|
| End bp | 244009 |
|---|
| Gene Length | 2196 bp |
|---|
| Protein Length | 731 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 639764819 |
|---|
| Product | photosystem P840 reaction center, large subunit |
|---|
| Protein accession | YP_910710 |
|---|
| Protein GI | 119356066 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 4 |
|---|
| Plasmid unclonability p-value | 0.0118063 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAC AAGTGAATCC GGCAGGAGTC AAGCCAAAGG GGTCTGTCCC ACCTCCCAAG
GGGAATGCTC CTTCTCCAAA GGGAAACGGC GCCTCAGGCG GTCCATCTGT TATCAAGGAA
CAGGATGCCG CTAAAATGAG AAGGTTTCTG TTCCAGCGAA CAGAGACGCG ATCAACCAAG
TGGTATCAGA TTTTCGATAC CGAAAAGCTT GATGACGAGC AGGTAGTCGG AGGTCATCTC
GCGCTTCTTG GCGTTATGGG CTTTCTGATG GCGATCTACT ACATCTCGGG AATTCAGGTT
TTTCCCTGGG GAGCGCCCGG TTTTCATGAC AACTGGTTTT ATCTGACGAT CAAGCCTCGT
ATGGTATCGA TGGGTATCGA TACATACAGC ACCAGAAGTG CCGATCTTGA GCAGGCGGCA
ACAAATCTGC TTGGATGGGC ATTGCTCCAT GTTATTTCCG GATCTATTCT TCTTTTTGGC
GGATGGCGTC ACTGGACACA CAATCTCACG AATCCCTTTA CCGGGCGTGC GGGAAATTTC
CGCGACTTCA GATTCCTCGG TAAGTTCGGT GATGTTGTTT TCAGCGGCAC AAGCGCAAAG
TCCTACAAGG ATGCACTTGG ACCACACGCG GTCTATATGT CGCTTCTTTT TCTTGGATGG
GGTTTGATTA TGTGGCTGGC ACTCGGATGG GCGCCTGTTC CTGATTTTCA GACAATCAAT
TCAGAGACAT TCATGTCTTT TGTATGGTTT GTTGTGTTTT TCGCACTTGG CATTTACTGG
TGGAACAACC CGCCAAATGC AGCAACCCAT CTCAACGATG ACATGAAGGC TGCTTTTTCG
GTGCACCTTA CAGCAATCGG ATATATTAAT ATCGCTCTCG GCGTGATTGC TTTTGTTGCG
TTTCAGCAAC CCTCTTTTGC TCCTTATTAC AAGGAACTCG ACAATCTTGT TTTTTATCTC
TATGGTGAGC CATTCAACAG AGTCAGTTAT GATTTTGTAC AGGAAGGCGG ACAGATTGTT
TCCGGATCGA AGGAGTTTAC TGAATTTGCT CCGTACGCCA TTCTTCCTAA AAATGGCGAA
GCTTTCGGAA TGTCGCGGGT TGTTATCAAT CTGATTACCT TCAATCACAT TATCTGCGGT
GTTCTCTATG TTTTTGCAGG CGTCTATCAT GGAGGCCAGT ATCTCCTTAA GATTCAGTTG
AATGGACTTT ACAATCAGAT CAAGTCAATC TGGATTACAA AAGGTCGTGA TCAGGAAGTT
CAGGTCAAGA TTCTTGGAAC CGTTATGGCT CTCTGTTTTG CAACCATGCT TTCCGTTTAC
GCAGTGATCG TCTGGAACAC GATATGTGAG CTGAACATTT TCGGCACAAA TATCATGATG
TCGTTTTACT GGCTGAAACC ACTACCGATG TTTCAGTGGA TGTTTGCAGA CCCGAGCATT
AACGACTGGG TAATGGCTCA CGTAATTACG GCTGGTTCCC TGTTCTCCCT TATTGCTCTG
GTACGTATCG CGTTTTTTGC GCATACCTCT CCGCTTTGGG ATGATCTTGG ACTCAAAAAG
AACTCCTACT CTTTCCCTTG TCTTGGTCCG GTTTACGGTG GAACATGCGG TGTTTCCATT
CAGGATCAGC TCTGGTTTGC CATGCTCTGG GGAGTCAAAG GTCTTTCAGC GGTATGCTGG
TATATTGACG GTGCATGGAT TGCCTCGATG ATGTATGGTG TTCCTGTTGC CGATGCAAAG
GCATGGGACT CTGTTGCCGG ACTTCAGCAT CACTATACCT CTGGCATATT CTATTATTTC
TGGACTGAAA CGGTGACGAT TTTCTCAAGT TCTCATCTTT CGACTATTCT GATGATCGGT
CACCTTATCT GGTTTATCAG CTTTGCTGTA TGGTTTGAGG ATCGCGGTTC GCGTCTTGAA
GGTGCTGATA TTCAGACCCG TACCGTCCGC TGGCTTGGGA AGAAATTCCT TAACAGAGAC
GTTACCTTCA GGTTCCCGGT ACTGACTATT TCGGATTCAA AGCTTGCCGG TACGTTCCTG
TATTTCGGTG GTACCTTTAT GCTGGTCTTC CTGTTCATTG CAAACGGTTT TTATCAGACC
AACTCACCAT TACCGCCGAC AGTCGGGGAT GCATCCCTTT CAGGGCAGCA GATGTTGACG
CAGGTGGTTG ATTATCTGAT GAAGTTGATT GCTTGA
|
|---|
| Protein sequence | MAEQVNPAGV KPKGSVPPPK GNAPSPKGNG ASGGPSVIKE QDAAKMRRFL FQRTETRSTK
WYQIFDTEKL DDEQVVGGHL ALLGVMGFLM AIYYISGIQV FPWGAPGFHD NWFYLTIKPR
MVSMGIDTYS TRSADLEQAA TNLLGWALLH VISGSILLFG GWRHWTHNLT NPFTGRAGNF
RDFRFLGKFG DVVFSGTSAK SYKDALGPHA VYMSLLFLGW GLIMWLALGW APVPDFQTIN
SETFMSFVWF VVFFALGIYW WNNPPNAATH LNDDMKAAFS VHLTAIGYIN IALGVIAFVA
FQQPSFAPYY KELDNLVFYL YGEPFNRVSY DFVQEGGQIV SGSKEFTEFA PYAILPKNGE
AFGMSRVVIN LITFNHIICG VLYVFAGVYH GGQYLLKIQL NGLYNQIKSI WITKGRDQEV
QVKILGTVMA LCFATMLSVY AVIVWNTICE LNIFGTNIMM SFYWLKPLPM FQWMFADPSI
NDWVMAHVIT AGSLFSLIAL VRIAFFAHTS PLWDDLGLKK NSYSFPCLGP VYGGTCGVSI
QDQLWFAMLW GVKGLSAVCW YIDGAWIASM MYGVPVADAK AWDSVAGLQH HYTSGIFYYF
WTETVTIFSS SHLSTILMIG HLIWFISFAV WFEDRGSRLE GADIQTRTVR WLGKKFLNRD
VTFRFPVLTI SDSKLAGTFL YFGGTFMLVF LFIANGFYQT NSPLPPTVGD ASLSGQQMLT
QVVDYLMKLI A
|
|---|
| |