| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cpha266_0035 |
|---|
| Symbol | |
|---|
| ID | 4568923 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Chlorobium phaeobacteroides DSM 266 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008639 |
|---|
| Strand | + |
|---|
| Start bp | 35469 |
|---|
| End bp | 36785 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 639764636 |
|---|
| Product | PpiC-type peptidyl-prolyl cis-trans isomerase |
|---|
| Protein accession | YP_910529 |
|---|
| Protein GI | 119355885 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0760] Parvulin-like peptidyl-prolyl isomerase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGAAAA TGTTGACCGC AGCAGTGTTT GTTATGCTTG TTGCCTTCTC TTTTACCTTG
GGCAATCTTC ATGCTGATGT TGCTGATCGT ATTGTAGCCG TTGTTGGTAA TGAGGTTATA
CTCAAGTCTG AAATTGATGA CCGCGCGTTG ATGACCGTCA TGCAGTATCC CGAGACGCAG
AAGGATACTC GTCTGAAAGA AAAAATTCTT GCCGGAATTA TTGATCAGAA AGTGATTCTC
GTCAAGGCCA GGATTGACAG TACGCAGGTT GACGAAAGTA CACTTGACGC ATTGACCAAT
GAGAGGCTTA AAATGCTGGC ATCTCGTTTT GCTTCCAAAG AGGCCATGGA GGAGAAGTTC
GGAAAATCTA TGGGCGTAAT CCGCCAGGAA ATTCGCAATG AACTGAAAGA CCAGCAGCTT
ATCGAAACGC TGCGTAAAAA GCAGCTTGCA GGCATTACCG TCACCCATGA GGAAACGGTT
GATTTTTATC GTAATCATAA GCAGCAGTTG CCGCAGGTTT CTGAACTGGT TGGGTTATCG
CAGATTCTGA AATATCCTGA TCTGCCCCAG GGAAGCAAAG ATGCCGCTCT GGCTCAGATG
AAGATAGTTC AGGCAGAACT GAAGGCCGGA GCGGATTTTG CCGCAACGGC AAGAAAATAC
TCTCAGGATC CAGGCTCTGC TAAGCTTGGG GGAGATCTTG GATATGTGCA AAAAGGAGAA
CTTGTTCGTA GCTTTGAGGA TGCCGCGTTT TTGCTCAAAG ATGGAAAAAT ATCCGATATT
GTCGAAACCC GATACGGCTA TCACATTATC CAGCGACTTG AAAAAAAACC GAATGCCGTT
CATTTGCGAC ATATACTGAT AGCTTATGAT CAATCAAAGA CAGACGAACC GGGTACGGTT
CAGCTTCTCA GTCGGATCAA ATCGGACGTT CTGGCAGGTC GGGCTACCTT TGCCGATATG
GCTAAAAAAT ATTCCGACGA CCCTGTTTCC GGGAAGCTCG GAGGGGTTAT TCTTTCTGGC
GGTTCGGGAA AAACATTGCT TCCGGTAGCT TCGCTTCGTC CTCAAATGAT GCAGATTGTA
GGAAGTCTGA GAAATATCGG CGATATATCC GATCCTCAAA AAATCGATTT TCAGAAGGGA
AACCTGTTTT ACGGAATCTT TCAATTGAAT GCGAAAATAC CGGTACACCA GCTTAATCTG
GAACAGGACT ACGCATCTCT TGAAGAGCTG GCTCTTGAAG CCAAAAAGCA GGAGCGATAT
AACGAATGGC TCAGCCAGCT CAAAAAAGAG GTACTTGTCC GAATATCAGA CATCTAA
|
|---|
| Protein sequence | MKKMLTAAVF VMLVAFSFTL GNLHADVADR IVAVVGNEVI LKSEIDDRAL MTVMQYPETQ
KDTRLKEKIL AGIIDQKVIL VKARIDSTQV DESTLDALTN ERLKMLASRF ASKEAMEEKF
GKSMGVIRQE IRNELKDQQL IETLRKKQLA GITVTHEETV DFYRNHKQQL PQVSELVGLS
QILKYPDLPQ GSKDAALAQM KIVQAELKAG ADFAATARKY SQDPGSAKLG GDLGYVQKGE
LVRSFEDAAF LLKDGKISDI VETRYGYHII QRLEKKPNAV HLRHILIAYD QSKTDEPGTV
QLLSRIKSDV LAGRATFADM AKKYSDDPVS GKLGGVILSG GSGKTLLPVA SLRPQMMQIV
GSLRNIGDIS DPQKIDFQKG NLFYGIFQLN AKIPVHQLNL EQDYASLEEL ALEAKKQERY
NEWLSQLKKE VLVRISDI
|
|---|
| |