Gene Cpha266_0028 details

Gene Information

• Locus tag: Cpha266_0028
• ID: 4568916
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Chlorobium phaeobacteroides DSM 266
• Kingdom: Bacteria
• Replicon accession: NC_008639
• Strand: -
• Start bp: 27338
• End bp: 29203
• Gene Length: 1866 bp
• Protein Length: 621 aa
• Translation table: 11
• GC content: 48%
• IMG OID: 639764629
• Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
• Protein accession: YP_910522
• Protein GI: 119355878
• COG category: [D] Cell cycle control, cell division, chromosome partitioning
• COG ID: [COG0445] NAD/FAD-utilizing enzyme apparently involved in cell division
• TIGRFAM ID: [TIGR00136] glucose-inhibited division protein A

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTACGATA TTATTGTTGC TGGTGCGGGC CATGCGGGAT GTGAAGCCGT TCTTGCCGCC 
GCAAGAACAG GAATGTCCTG TCTCCTGATC ACATCGGATC TTTCGGCAAT TGCAAGAATG 
TCCTGCAATC CCGCTATCGG AGGCGTAGCG AAAGGGCAGA TAACGAGAGA AATCGACGCC 
CTCGGAGGAG AGATGGCAAA AGCAATCGAT GAGACCGGCA TACAGTTCAG AATGCTGAAT 
AAAAGTAAAG GTGCGGCAAT GCACTCACCG AGAGCTCAGG CAGACCGCGC GCTCTACTCT 
GTTTACATGC GCAAAATCAT AGAAGAACAG GATAATATCG ATCTTGTTCA GGATACGGTA 
ACAGGCCTGG ACGTAGAGAG CGGAGCGGTT CGAGGGGCGA TTCTTCCCTC AGGGCGGATA 
ATCAAGGGTA AATCGGTCAT TCTCTGCTGC GGAACCTTCC TTAACGGACT CATCCATATC 
GGCATGAACC ACTTTCCCGG CGGAAGAACC ATTGCCGAAC CGCCGGTTTC GGGGCTTACC 
GAAAACCTTC AATCGCTGGG ATTTCGCGCA GGAAGACTTA AAACAGGTAC GCCGCCTCGA 
ATTGATTCGC GCAGCGTAAA TTACTCACTT GTTGAAGAAC AGTCGGGCGA TCCTGATCCG 
AGACCATTCT CCTTTCATAC CGATTCGCTC GGTCATCGAG CCCAGGTCAG TTGTTTCGTC 
ACAAAAACAA AAGAAACAAC GCACGAACTT CTCAGAACGG GGTTCAGTCG ATCCCCGTTA 
TTTTCAGGCA AAGTACAGGG CGTAGGGCCA CGATACTGTC CGTCAGTCGA GGATAAAATA 
TTTCGTTTCC CCGACAAAAA CAGCCATCAT ATCTTCCTCG AACCGGAAGG TGCCGAAACA 
AACGAAATGT ATGTGAACGG TTTTTCGACA TCGCTGCCTG AAGATATACA ACTGCTTGCC 
TTGCGATCGA TCCCTGGTCT CGAGCATGTT AAAATGATCA GACCCGGATA TGCCATTGAG 
TACGACTTCT TTTTTCCATA CCAGATAAAA AATACTCTTG AAACGAAAAT CATTGAAAAC 
CTCTATTTTG CCGGACAGAT TAACGGTACG TCAGGCTATG AAGAGGCGGC TGCACAGGGG 
CTTATGGCAG GAATAAACGC ATCGCTCAAA ATACAAAACA GGAAACCCTT CGTACTCGAT 
CGATCGCAGG CCTATATAGG CGTCCTTATT GATGATCTTG TAACAAAAGA TATTATCGAA 
CCCTACAGAA TGTTCACCTC TTCGGCAGAA CATCGAATCA GCCTCCGTCA TGATAACGCC 
GATATCCGTT TATGTCGGAT GGGTCATGAG GCAGGAACGG TCGATTTCTC TTCGTTTACG 
AAAACCGAGT ATAAAATCAG CGCCATCAGG CAACTCCGGC AACTGTGTGA TACCATGAAA 
CTGCATCCTG ATCAAATAAT CAGCGCAATG GCCGGCGCAG CACAACAACC GCCATTGCAA 
CCAATAGCGA TATCGAACCT TCTTAAAAGA CCTGAAATCG ATTTCGAAAA TCTCCTTGTG 
CTGTCGGAAG ATTTTCGAGC CGGTGTTAAT GAGATAACAA CAGATCCCGA TGTATTTGAA 
CAGGTTGTCA TCGATCTGAA ATATGAAGGG TACCTTAAAC GGGATCTGTT AATGACTGAA 
AAGATAGCCC GTCTTGAATC CCATAGTATT CCAGGCTCCT TTTCCTATGC AACAGTGTCG 
GGACTTTCAA ATGAAGGACG CGAAAAACTG ACGCTCCACA AACCGGAAAC TATCGGACAG 
GCATCCAGAA TTCCCGGCGT CTCTCCATCT GATATATCGG TACTCCTGAT AAAAATCGGG 
CGATGA 

 

Protein sequence

MYDIIVAGAG HAGCEAVLAA ARTGMSCLLI TSDLSAIARM SCNPAIGGVA KGQITREIDA 
LGGEMAKAID ETGIQFRMLN KSKGAAMHSP RAQADRALYS VYMRKIIEEQ DNIDLVQDTV 
TGLDVESGAV RGAILPSGRI IKGKSVILCC GTFLNGLIHI GMNHFPGGRT IAEPPVSGLT 
ENLQSLGFRA GRLKTGTPPR IDSRSVNYSL VEEQSGDPDP RPFSFHTDSL GHRAQVSCFV 
TKTKETTHEL LRTGFSRSPL FSGKVQGVGP RYCPSVEDKI FRFPDKNSHH IFLEPEGAET 
NEMYVNGFST SLPEDIQLLA LRSIPGLEHV KMIRPGYAIE YDFFFPYQIK NTLETKIIEN 
LYFAGQINGT SGYEEAAAQG LMAGINASLK IQNRKPFVLD RSQAYIGVLI DDLVTKDIIE 
PYRMFTSSAE HRISLRHDNA DIRLCRMGHE AGTVDFSSFT KTEYKISAIR QLRQLCDTMK 
LHPDQIISAM AGAAQQPPLQ PIAISNLLKR PEIDFENLLV LSEDFRAGVN EITTDPDVFE 
QVVIDLKYEG YLKRDLLMTE KIARLESHSI PGSFSYATVS GLSNEGREKL TLHKPETIGQ 
ASRIPGVSPS DISVLLIKIG R