Gene Cpha266_0003 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0003 
Symbol 
ID4568891 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp3303 
End bp4400 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content35% 
IMG OID639764611 
ProductDNA replication and repair protein RecF 
Protein accessionYP_910504 
Protein GI119355860 
COG category[L] Replication, recombination and repair 
COG ID[COG1195] Recombinational DNA repair ATPase (RecF pathway) 
TIGRFAM ID[TIGR00611] recF protein 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGAGGCTTA CACGAATAAC CTACAATAAC TTCAGGAATT ACAGAAAAAT GACCTTTGAA 
CCGAATGCAG GGATAACCCT TCTTTATGGT TCAAATGGAT CCGGAAAAAC AAATATTCTT
GAGGGCATTC ATTATTGTGC TCTTACAAAA GGTTTTACGA GTATTGCCGA TAGTGACTGT
ATTTTTGATT CCAGTGATTA TTATGCCCTG CAAAGTACTT GTTTGGGTGA AAATGGCAGT
GATATTGAAG TCAGAATATC GTTCTCAAGA GAGAAAGGCA AAACTCTTTT TGTTAATAAT
AACGAGATTA AAAAATTTTC CAATCATGTT GGTACCATTC CCTGTATAAC ATTTTCTCCC
CCTGAAATAT CAATTGTCAG CGGATCTCCA TCAGAAAGAA GAAAATTCAT AGACAATATT
ATTTGTCAAT CTGATAAAAA ATATTTAAAG GATCTCTTGA CATATCGACG GGTTCTTCTT
CAGAGAAATG CTCTTCTTGC ACAAATCAGT GAAAAAAAAT CTTCTATAAA TATGCTTCCG
TATTGGTCGG AAAATCTTTC GGTTCTGGCA GCTTCAATTG TTTTTAAACG CTTGGAATTT
TTAGATAAAT TCATTGATAA CTTCAGAGAT CTTTTTAAAA AACTTTCTAT TAACGAAGAA
CCTGGAATAG TTTATCGTTC AGTATTGGGC AGATATGATA ACATCAGGAA TATCGATGAA
CTTGCAGCTC TATATTATAG AAAATATGAT GATAATCTTC GATATGAGTT ATTGAGATCT
CAAACATCCT GCGGACCTCA CAGGGATGAT CTTGAATTTT ATATAAACGA TAAAGAGATA
AAAAAATACG CATCGCAGGG TCAGTTAAGG ACTTTTCTAA TCGGTCTCAA ACTTGCTGTT
TACGATTATC TTTTCGATAC GACGCATGAA AAGCCTATAT GTCTTCTTGA CGACATTTTC
AGTGAACTTG ATACGCAAAG AACGGAAAAT ATTCTCTCTA TACTTCAAAC ACTCGGCCAG
TCGATCATTA CCTCTACGGT CAGAAGAGAT TCGGATATTA TTTCAAGCGT TTCTGTACAC
GATTTAATCA ACGATTAA
 
Protein sequence
MRLTRITYNN FRNYRKMTFE PNAGITLLYG SNGSGKTNIL EGIHYCALTK GFTSIADSDC 
IFDSSDYYAL QSTCLGENGS DIEVRISFSR EKGKTLFVNN NEIKKFSNHV GTIPCITFSP
PEISIVSGSP SERRKFIDNI ICQSDKKYLK DLLTYRRVLL QRNALLAQIS EKKSSINMLP
YWSENLSVLA ASIVFKRLEF LDKFIDNFRD LFKKLSINEE PGIVYRSVLG RYDNIRNIDE
LAALYYRKYD DNLRYELLRS QTSCGPHRDD LEFYINDKEI KKYASQGQLR TFLIGLKLAV
YDYLFDTTHE KPICLLDDIF SELDTQRTEN ILSILQTLGQ SIITSTVRRD SDIISSVSVH
DLIND