Gene Cpha266_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagCpha266_0002 
Symbol 
ID4568533 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameChlorobium phaeobacteroides DSM 266 
KingdomBacteria 
Replicon accessionNC_008639 
Strand
Start bp1895 
End bp3025 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content41% 
IMG OID639764610 
ProductDNA polymerase III, beta subunit 
Protein accessionYP_910503 
Protein GI119355859 
COG category[L] Replication, recombination and repair 
COG ID[COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) 
TIGRFAM ID[TIGR00663] DNA polymerase III, beta subunit 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACATGA AATTCACCGC TCCAATTCGT CTCTTGCAGG ATGCCGTTAA CCGGGTAAGT 
CAGGCAATTC CGTCAAAAGC AATCGATCCG CGTTTTGAAA ATATCCATCT TGCTATTGAA
CCGGGAAAAT TGACCCTTTT TGCCTCAGAC GGCGAGATGT CGATTACTGC AAAAAGTGAA
ATCAGTTCTG AAGACACAGG AAATATCAGT ATCAAAGCAA GAACCCTTCA GGATTTTCTT
CGAAGCATGT ATGATACCGA GGTCACCTTC TCTATTGAAC GACAGGAGAT CAGTGATCAT
GGGACAGTAT CCATTTCAAC CGATAAAGGC AAGTACAAGA TCCCCTGTTT TTTTGAGAGC
AAAATGGAGA TCTATGAAAA AAATTATGTG ATCAACCTGG ATCTCCCCTC AGTAGAATTA
CAGTATCTTA TTCAGAAAAC AATTTTCGCC TGCAGCGTCG ATGGTATGAG GCCGGCAATG
ATGGGTGTTC TTTTTGAACT GGAAAGCTCA TCGATTACCG CTGTTTCAAC TGACGGTCAC
AGACTTGTTC GTTGTAGAAA AAGTACGGTG ATAGAAGTAG AAGACAAGCA GAAAATTGTC
GTTTCTGCGC GCGTTCTCTC TATTTTACAG AAGCTGCCTC TTCATGAAAC CGTTATAATT
CAGATTGATC AGGATAAACG ATTCGTTCGT TTCACACAAA ATAATGTCGT TATCGATGCT
TCGCTGATCG TCGAACCATA CCCTAATTAC GAGGCAGTGA TCCCTGTGAT CCACGATAAG
CAGGTAAGTT GTGATCGATC CAATATCTAC GATTCAGTAA AAAGAGTCGG AAGATTTTCA
AGCGTTGGCG ATATCAAGAT GGTTTTAGCC GATTCGATTA TAAAGGTAAT GGCTGAAAAT
ACCAACGAAG GAGAATCTGC CCAGGAGGAG TTGCCGTGTT CCTATACCGG CGAAGATATT
ACAATAGGTT TCAATGCGAA ATTTATCGAG GCCGCTTTAG CGCATATTGA CGAAAAAGAG
ATTATCATTG AATTAAAAAG CCCTACGACA GCAGTAATAT TTAAACCTGT CCAGGAAAAA
GAAACCGGCA GTCTTATTAT TCTTGTTATG CCTGTACGGA TTAACGCATA A
 
Protein sequence
MNMKFTAPIR LLQDAVNRVS QAIPSKAIDP RFENIHLAIE PGKLTLFASD GEMSITAKSE 
ISSEDTGNIS IKARTLQDFL RSMYDTEVTF SIERQEISDH GTVSISTDKG KYKIPCFFES
KMEIYEKNYV INLDLPSVEL QYLIQKTIFA CSVDGMRPAM MGVLFELESS SITAVSTDGH
RLVRCRKSTV IEVEDKQKIV VSARVLSILQ KLPLHETVII QIDQDKRFVR FTQNNVVIDA
SLIVEPYPNY EAVIPVIHDK QVSCDRSNIY DSVKRVGRFS SVGDIKMVLA DSIIKVMAEN
TNEGESAQEE LPCSYTGEDI TIGFNAKFIE AALAHIDEKE IIIELKSPTT AVIFKPVQEK
ETGSLIILVM PVRINA