Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Cpha266_0002 |
Symbol | |
ID | 4568533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Chlorobium phaeobacteroides DSM 266 |
Kingdom | Bacteria |
Replicon accession | NC_008639 |
Strand | + |
Start bp | 1895 |
End bp | 3025 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639764610 |
Product | DNA polymerase III, beta subunit |
Protein accession | YP_910503 |
Protein GI | 119355859 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0592] DNA polymerase sliding clamp subunit (PCNA homolog) |
TIGRFAM ID | [TIGR00663] DNA polymerase III, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACATGA AATTCACCGC TCCAATTCGT CTCTTGCAGG ATGCCGTTAA CCGGGTAAGT CAGGCAATTC CGTCAAAAGC AATCGATCCG CGTTTTGAAA ATATCCATCT TGCTATTGAA CCGGGAAAAT TGACCCTTTT TGCCTCAGAC GGCGAGATGT CGATTACTGC AAAAAGTGAA ATCAGTTCTG AAGACACAGG AAATATCAGT ATCAAAGCAA GAACCCTTCA GGATTTTCTT CGAAGCATGT ATGATACCGA GGTCACCTTC TCTATTGAAC GACAGGAGAT CAGTGATCAT GGGACAGTAT CCATTTCAAC CGATAAAGGC AAGTACAAGA TCCCCTGTTT TTTTGAGAGC AAAATGGAGA TCTATGAAAA AAATTATGTG ATCAACCTGG ATCTCCCCTC AGTAGAATTA CAGTATCTTA TTCAGAAAAC AATTTTCGCC TGCAGCGTCG ATGGTATGAG GCCGGCAATG ATGGGTGTTC TTTTTGAACT GGAAAGCTCA TCGATTACCG CTGTTTCAAC TGACGGTCAC AGACTTGTTC GTTGTAGAAA AAGTACGGTG ATAGAAGTAG AAGACAAGCA GAAAATTGTC GTTTCTGCGC GCGTTCTCTC TATTTTACAG AAGCTGCCTC TTCATGAAAC CGTTATAATT CAGATTGATC AGGATAAACG ATTCGTTCGT TTCACACAAA ATAATGTCGT TATCGATGCT TCGCTGATCG TCGAACCATA CCCTAATTAC GAGGCAGTGA TCCCTGTGAT CCACGATAAG CAGGTAAGTT GTGATCGATC CAATATCTAC GATTCAGTAA AAAGAGTCGG AAGATTTTCA AGCGTTGGCG ATATCAAGAT GGTTTTAGCC GATTCGATTA TAAAGGTAAT GGCTGAAAAT ACCAACGAAG GAGAATCTGC CCAGGAGGAG TTGCCGTGTT CCTATACCGG CGAAGATATT ACAATAGGTT TCAATGCGAA ATTTATCGAG GCCGCTTTAG CGCATATTGA CGAAAAAGAG ATTATCATTG AATTAAAAAG CCCTACGACA GCAGTAATAT TTAAACCTGT CCAGGAAAAA GAAACCGGCA GTCTTATTAT TCTTGTTATG CCTGTACGGA TTAACGCATA A
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Protein sequence | MNMKFTAPIR LLQDAVNRVS QAIPSKAIDP RFENIHLAIE PGKLTLFASD GEMSITAKSE ISSEDTGNIS IKARTLQDFL RSMYDTEVTF SIERQEISDH GTVSISTDKG KYKIPCFFES KMEIYEKNYV INLDLPSVEL QYLIQKTIFA CSVDGMRPAM MGVLFELESS SITAVSTDGH RLVRCRKSTV IEVEDKQKIV VSARVLSILQ KLPLHETVII QIDQDKRFVR FTQNNVVIDA SLIVEPYPNY EAVIPVIHDK QVSCDRSNIY DSVKRVGRFS SVGDIKMVLA DSIIKVMAEN TNEGESAQEE LPCSYTGEDI TIGFNAKFIE AALAHIDEKE IIIELKSPTT AVIFKPVQEK ETGSLIILVM PVRINA
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