Gene Ppro_3516 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3516 
Symbol 
ID4574427 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp3888289 
End bp3889755 
Gene Length1467 bp 
Protein Length488 aa 
Translation table11 
GC content60% 
IMG OID639757575 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_903166 
Protein GI118581916 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit
[COG2221] Dissimilatory sulfite reductase (desulfoviridin), alpha and beta subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAACCCA AAAAGCAGCT GCGGATAGCG ACCAGGAACT GCGGTTTCAT CGATCCGGAA 
AATATCGAGG ATTACATCGG GGTGCGCGGC TACGAGGCGC TGGCCAGCGC CATTACCAAC
GGCACGCCTG CCGGAGTGAT CGAGCAGATG AAAAAATCGG GCTTGAGGGG GCGGGGTGGC
GGCGGTTTCC CCACTGGCGT CAAGTGGGCA TTTGCCGCCG CGAATCAGGC TGACCAGAAA
TACGTCGTCT GCAATGCGGA CGAGGGGGAC CCTGGCGCCT TCATGGATCG GGCCCTGCTG
GAGGGGGATC CCCATTCCAT AGTGGAGGCC ATGGCCATCT GCGGCTACGC CATCGGCGCA
TCCATCGGCG TCGTCTACAT CCGGGCCGAA TACCCCCTAG CAATCAAACG GCTGATCAAG
TCCATCGAGG ATGCCCGTGA CTACGGCCTC CTGGGCAGGA ACATTCTCGG TACCGGCTTC
AATTTCGACA TAGAACTGAA GTATGGCGCC GGCGCCTTTG TCTGCGGCGA GGAGACCGCC
CTGATCAGGT CCATGGAAGG GAGCCGCGGC GAACCGTACA CCAAGCCCCC CTTTCCGGCC
AGCGCCGGGT ACTGGGGCAA ACCTACCATC GTCAACAACG TGGAGACCCT TGCCAATATC
CCCCCTATCC TCGTCAAGGG GGCTGACTGG TTCTCCTCCA TCGGTACGGA GAATTCCAAG
GGGACCAAGG TCTTCGCCCT GGCCGGCAAG ATCACGAACG TCGGCCTGAT CGAGGTTCCC
ATGGGCATAA CCCTGGGTGA GATCATCTTC GAGATCGGCG GCGGCTGCCC GAATGGCAAA
CAGTTCAAGG CGGTGCAGAC CGGCGGCCCC TCCGGCGGCG CGCTGACCTC CAGGGATATC
GATGTCCCCA TCGACTATGA CAATCTGATC GCCAGAGGCT CCATGATGGG CTCCGGCGGC
ATGATCGTCA TGGATGAGGA CAACTGCATG GTCGACGTGG CCAAGTTCTT CCTCGACTTC
ACCATGGATG AGACTTGCGG CAAATGCACC CCCTGCCGCA TCGGTTCAAA ACGGCTCCAT
GAGATCCTCT GCCGGATCAC CCAGGGCGAG GGCACACTGG AGGATATGGA AAACCTGCAA
TGTCTCGGCG CAACCATCAA GGACACGGCG CTGTGCGGCT TCGGCCAGAC CATGCCCAAC
CCGGTGCTCT CCACCATCAG GACCTTCATG GATGAATACC GTGCCCATGT AGTTGACAAG
AAGTGCCCGG CCGGGGTCTG TGTCAGCCTG CTGGAAATTG TCATCCTGGC CGAAAGCTGT
GTCGGCTGCA CCCTCTGCAG CCGTGTCTGC CCGGTCAACT GCATCTCCGG TACGGTCAAA
GGTGTGCATG TCATCGATCA GGCAGCCTGC ATCAAGTGCG GCGCCTGCAT CGACGCGTGC
AAATTCCAGG CGATAGTGAA ACGATGA
 
Protein sequence
MEPKKQLRIA TRNCGFIDPE NIEDYIGVRG YEALASAITN GTPAGVIEQM KKSGLRGRGG 
GGFPTGVKWA FAAANQADQK YVVCNADEGD PGAFMDRALL EGDPHSIVEA MAICGYAIGA
SIGVVYIRAE YPLAIKRLIK SIEDARDYGL LGRNILGTGF NFDIELKYGA GAFVCGEETA
LIRSMEGSRG EPYTKPPFPA SAGYWGKPTI VNNVETLANI PPILVKGADW FSSIGTENSK
GTKVFALAGK ITNVGLIEVP MGITLGEIIF EIGGGCPNGK QFKAVQTGGP SGGALTSRDI
DVPIDYDNLI ARGSMMGSGG MIVMDEDNCM VDVAKFFLDF TMDETCGKCT PCRIGSKRLH
EILCRITQGE GTLEDMENLQ CLGATIKDTA LCGFGQTMPN PVLSTIRTFM DEYRAHVVDK
KCPAGVCVSL LEIVILAESC VGCTLCSRVC PVNCISGTVK GVHVIDQAAC IKCGACIDAC
KFQAIVKR