Gene Ppro_3506 details

Gene Information

• Locus tag: Ppro_3506
• ID: 4574355
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: -
• Start bp: 3876130
• End bp: 3877935
• Gene Length: 1806 bp
• Protein Length: 601 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 639757565
• Product: GTP-binding protein TypA
• Protein accession: YP_903156
• Protein GI: 118581906
• COG category: [T] Signal transduction mechanisms
• COG ID: [COG1217] Predicted membrane GTPase involved in stress response
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR01394] GTP-binding protein TypA/BipA

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.0000140002
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAGGAAC GAATCAGAAA CATCGCCATC ATCGCCCACG TCGACCATGG CAAGACTACC 
CTGGTGGATG CAATGCTGCG TCACGCCGGC GTTTTCCGCG AAAACGAGGC CATCACCGAG 
CGGGTCATGG ACTCCAACGA CCTGGAGAAG GAGCGCGGCA TCACCATCCT GGCCAAGAGC 
CTCTCCATCC ACCACGGCCG CTACAAGATC AATATCGTCG ACACCCCCGG CCATGCCGAT 
TTCGGCGGCG AGGTGGAGCG CGTGCTGAAG ATGGTGGATT CGGTTCTGCT GCTGGTGGAC 
GCCCTGGACG GTCCCATGCC CCAGACCCGC TTCGTGCTGA AGAAATCGCT GGACCTGGGG 
CTCAAGCCGA TCGTTGTCAT CAACAAGATC GACCGCCCCG GTTCCCGTCC TGACGAGGTG 
CTCAACATGG TCTTCGACCT GTTCTGCGAG CTGAACGCCT CCGACGAACA GCTTGACTTC 
CCGGTGGTCT ACACCAGCGC CAAGGTGGGC TATGCCAAGC TGGACATGGC CAGCGAATCC 
ACCAGCATGG AGCCGCTCTT CGCCGTTGTC GAGTCAAACG TACGCCCCCC CAAGGGGGAT 
GCAACGGCAC CCTTCCAGAT GCTGATCGCC AACATCGATT ACAACGACTA CATCGGCCGC 
ATGGCCACCG GCCGCATCTT CAACGGCAAG GTCAAATCCG GCGAGACCGT GGCCATGATC 
AAGCGCGACG GTTCGATTAC GAAAGGCCGC ATTACCAAGC TTCTTGGTTA CCAGGGGCTC 
AAGCAGGTGG AGATCGAGGA GGCTGGTACC GGCGATATCG TTACTGTGGC CGGTTTCGAG 
GAGATCAGCA TCGGTGAGAC CCTGGCCTCG GCTGAAACTC CCATCGCGGT CCCCTACGTC 
TCCATCGACG AGCCGACACT GGCCATGAAC TTCATCGTCA ACACCTCCCC CTTTGCCGGT 
CGCGAGGGGA AATGGGTTAC CTCGCGTAAC ATCCGCGAGC GCCTTACCAA GGAGTTGCGC 
ACCAACGTCT CCCTCAGGGT CGAGGACACC GACAGCCCGG ACACCTTCAA GGTCTCCGGC 
CGCGGCGAAC TGCACCTCTC CATCCTGATC GAGAACATGC GGCGCGAGGG GTTCGAGCTG 
GCGGTCTCTA AGCCGGAGGT TATTACCCGC ATCAAGGATG GCGTCAAGAC CGAGCCTATG 
GAATACCTGG TGGTGGATGT GGCCTCCGAA TTCCAGGGCG CCATCATCGA AAAGATGGGA 
CCGCGCAAGG GGGAGCTGGC CGCCATGTCC CCCATGGGAG AGATGGTGCG CATGGAGTTC 
ATCATCCCGG CCCGCGGCCT GATCGGGCTG CGCGGCGAAG TTCTGACCGA CACCCGCGGC 
ACGGCGGTCA TGACCCACAC CTTCCACGAG TATGCTCCCT ACAAGGGTGA CATCCCGGGC 
AGGAAGAACG GCGTTCTGAT CGCCATGGAG CATGGCGAGA CCACCGCCTA CTCCCTGGAT 
GCCCTGCAAC CGCGTGGCAT CCTGTTCATC GGTGCCGCCA CAGAAGTCTA TGGCGGCATG 
ATCATCGGCC AGCACAGCAA GGACAACGAC CTGGACGTCA ACCCTTGCAA GGGTAAGAAG 
CTGACCAACG TGCGCGCCTC GGGAACCGAC GACGCCATCA AGCTGACTCC GCCGCGCCTC 
CTGACCCTGG AGCAGGCACT GGAGTTCATC GACGACGACG AGCTGGTGGA GGTGACGCCG 
CTCTCCATTC GCCTGCGCAA GAAGGAGTTG GACCCCACCA AGCGTAAGCG CGCCACCAAG 
GGTTAG 

 

Protein sequence

MQERIRNIAI IAHVDHGKTT LVDAMLRHAG VFRENEAITE RVMDSNDLEK ERGITILAKS 
LSIHHGRYKI NIVDTPGHAD FGGEVERVLK MVDSVLLLVD ALDGPMPQTR FVLKKSLDLG 
LKPIVVINKI DRPGSRPDEV LNMVFDLFCE LNASDEQLDF PVVYTSAKVG YAKLDMASES 
TSMEPLFAVV ESNVRPPKGD ATAPFQMLIA NIDYNDYIGR MATGRIFNGK VKSGETVAMI 
KRDGSITKGR ITKLLGYQGL KQVEIEEAGT GDIVTVAGFE EISIGETLAS AETPIAVPYV 
SIDEPTLAMN FIVNTSPFAG REGKWVTSRN IRERLTKELR TNVSLRVEDT DSPDTFKVSG 
RGELHLSILI ENMRREGFEL AVSKPEVITR IKDGVKTEPM EYLVVDVASE FQGAIIEKMG 
PRKGELAAMS PMGEMVRMEF IIPARGLIGL RGEVLTDTRG TAVMTHTFHE YAPYKGDIPG 
RKNGVLIAME HGETTAYSLD ALQPRGILFI GAATEVYGGM IIGQHSKDND LDVNPCKGKK 
LTNVRASGTD DAIKLTPPRL LTLEQALEFI DDDELVEVTP LSIRLRKKEL DPTKRKRATK 
G