| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3496 |
|---|
| Symbol | |
|---|
| ID | 4572663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 3863066 |
|---|
| End bp | 3864628 |
|---|
| Gene Length | 1563 bp |
|---|
| Protein Length | 520 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639757555 |
|---|
| Product | FAD-dependent pyridine nucleotide-disulphide oxidoreductase |
|---|
| Protein accession | YP_903146 |
|---|
| Protein GI | 118581896 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1251] NAD(P)H-nitrite reductase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTACGCA GTACTACTGT CCCGTCGAAT ATTGAGATTC TTACCCCAAT AAAGGAGCAC
GCCATGACCA ACGAAAAGCG ATGGATCTGC ACCCTCTGCG GCTATGTCCA TCAGGGAAGC
ACGCCCCCCG ACACATGCCC GATCTGCGGA GCCACCCCCG ATCTGTTCGA ACTTCAGACG
ACAACGGAAG CACCGCGCCA GGAAAGCGCT AGTGACCAGT GGGTCTGCCT GACCTGCGAC
TACATCCACC AGGGAACCTC CCCTCCGGCA ACTTGCCCGA TTTGCGGCCA GGGCGCGGAG
CAGTTCGAAC CGCACAGGGC TGACCAGCAG GGCGCGGGCG CGGCAGAAGC TGTTTCCGTC
GTCATCGTCG GCGCCGGCAT CGCCGGGGTC TCCGCAGCCG AGTCGATCCG TCGCGCATCT
CCCGCGGCGC GAATCACCCT GCTGGGCAAG GAACCGGACC TCCCCTACTA CCGCATCAAC
CTGACCCGCT ACCTGGCCGG AGAAATCTCC CGCGACGACC TGACCATGCA CCCGGAGCAG
TGGTACACCG ACAACGACAT CATTCTCCGC CTCTCCACCG AGATGCGCGG CTTCGACCCC
GCGAGCGGGC ATCTGACCCT GCACACCCAC GAGCAGCTCG CCTTCGACCG CCTGATCCTG
GCCATGGGGG CCCACCCCTT CGTCCCCCCC ATCCCCGGAG CCACCCGCAA AAACGTGACG
GTCCTGCGCA CCCTGGGGGA CGCCGACTTC ATCCTCGGCC AGCTGCGCCC CGGCCTGAAC
TGCACCATCA TCGGCGGCGG CGTCCTGGGG CTGGAGGCGG CCGGTGCCCT GGTCAAGCGC
GGCGCATCTG TTACCCAGCT GGAAGGGTTC CCCTGGCTGA TGCCCCAGCA ACTCAACCGT
ACCGCCGGCG GGCTGCTGGC CAGACATGCC GAAAAACTAG GCATCACAAT CCGCACCGAC
GCGCGCATCA AACAGATCGA CGGCGACGAA CGGGTGCACG GCGTCCTGCT GGAGAGCGGA
GAGAGCATCG CTTCGGACCT GGTGGTCATC ACTGCCGGAG TACGCTGCAA CAGCTATCTG
CCGCGCCAGG CACAGCTTAC GGTCAACCAG GGGGTAGTTG TCGACGACCA TCTCAAGAGC
AGCGCAGGGA ACATCCTTGC CGTGGGGGAT CTTGCCGAGC ACCGCGGCGT TTGCTACGGC
ACCTGGGTTC CGGCCCAGTT CCAGGGAAGC ATCGCCGGGC TGAACGCCGT GGGAGGAAAG
GTGGAGTTCG CCGGTATCCC CCGCTCCAAC ACCCTCAAGG TGCTCAACTT CGACCTGTTC
AGCATCGGAC AGGTTCACCC CGACGACGGC AGCTACCAGA GCTTTGAACA GATGGGCAAC
GATTGCTATC ACTATGTCGT TTTCCGGGAC AGCCGGCTGG TGGGCGCAAT CCTGATGGGA
GACATGGGAC CGGCAGCAGC CATCAAGCAC CTGATCGAAG CCAGGACGTC CTGCAGCGAT
CTGCTGCACA GAAATCCCGA CATAGATGGG ATCCTTGCCT TCATCGCGGC CGGTTCCCGC
TAG
|
|---|
| Protein sequence | MLRSTTVPSN IEILTPIKEH AMTNEKRWIC TLCGYVHQGS TPPDTCPICG ATPDLFELQT
TTEAPRQESA SDQWVCLTCD YIHQGTSPPA TCPICGQGAE QFEPHRADQQ GAGAAEAVSV
VIVGAGIAGV SAAESIRRAS PAARITLLGK EPDLPYYRIN LTRYLAGEIS RDDLTMHPEQ
WYTDNDIILR LSTEMRGFDP ASGHLTLHTH EQLAFDRLIL AMGAHPFVPP IPGATRKNVT
VLRTLGDADF ILGQLRPGLN CTIIGGGVLG LEAAGALVKR GASVTQLEGF PWLMPQQLNR
TAGGLLARHA EKLGITIRTD ARIKQIDGDE RVHGVLLESG ESIASDLVVI TAGVRCNSYL
PRQAQLTVNQ GVVVDDHLKS SAGNILAVGD LAEHRGVCYG TWVPAQFQGS IAGLNAVGGK
VEFAGIPRSN TLKVLNFDLF SIGQVHPDDG SYQSFEQMGN DCYHYVVFRD SRLVGAILMG
DMGPAAAIKH LIEARTSCSD LLHRNPDIDG ILAFIAAGSR
|
|---|
| |