| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3410 |
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| Symbol | |
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| ID | 4572335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 3765140 |
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| End bp | 3770506 |
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| Gene Length | 5367 bp |
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| Protein Length | 1788 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 639757469 |
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| Product | PAS sensor protein |
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| Protein accession | YP_903060 |
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| Protein GI | 118581810 |
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| COG category | [K] Transcription
[L] Replication, recombination and repair
[R] General function prediction only
[T] Signal transduction mechanisms |
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| COG ID | [COG0515] Serine/threonine protein kinase
[COG3899] Predicted ATPase
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCATGG AGCGGCTGCG CCATGAAGAG GCCATCATCA GGCGCCTGAA CCATCTGGAA
CACGTCTCCC GGCTGGCTAC CGCAACCTCG CCGGCCAATG CCCTGGTTCT TGAGGATGGG
GGTGACATAT CGCTGGCCCA CCTGATCGTC GGCCAGCGCC TTGAAATCCC CCGACTGCTG
AAACTGGCCC GTCAGCTGGC GGATATCGTG GCGACAGTGC ATGGCGCCGG TGTGACGCAC
CGGGACATCA ACCCCGGCAA TATCCTGCTG TCGGCTGAGG ATGCAGCCCC GATCCTGATC
GACTTCGACC ACGCCACCAC CTTTGCAGAG GAACGCCCCC CCTTCATCCA TCACCGCGAG
ATCGCCGGCA ACCTGCCCTA TCTGGCCCCC GAACAGACCG GCCGGGTGGG GCGCCCCCTG
GACCAGCGCG CCGACCTGTA CGGTTTGGGC GCCACGCTCT ACGAACTCGC CACCGGTACT
CCCCCTTTCA GCGCCCCGGA CCCGCTTGAA CTGATCCATC AGATCCTGAC GCAGGAACCC
ACACCGCCGG TCGAACGGGA ACCGCGACTT CCACGACAGC TGTCGCTGAT CATCATGCGT
CTGTTGGAGA AGGAGCCGGA CCGGCGCTAC CAGAGCGCGG AGGGGCTTGC CCACGACTTG
GCGCGACTAC GGGACGGAGA CGAGCAGTTC GACCTGGGCG AGCAGGACTT TCCCCTGCGT
TTCTCGCCGC CATCCCGGCT GGTGGGTCGG GAACAGGAGA TCCAGGCGCT GCGCAGCGCC
CTGGAGCGGG CCTGTGCCGG CCAGGGCGCT TGCGTGCTGG TCAGCGGCGC GCCCGGAATC
GGCAAAACCA CCCTGATCAA CGAGTTGCGG CCGATGGTCA CGGCGCGACG GGGATGGTTT
GTGTCCGGCA AATTCGATCA GTACCGCCGC GACCACGCTT CGGACGGCGT CGCGCAGGCT
CTGCGCGCGA TGGGTTGCCT GCTGCTGGCG GAAAACGAGG ATGAGCTTGG ACGCTACCGC
ATGCGCATCC TGGACAGGGT GGGGAGCAAT GCCGGTCTGA TCACCGCCGC GCTGCCCGAA
TTTGCCACCC TCCTGGGGGT TGCGCCGGCG GCCATATCCG GTGATCCGCT GGAGGCGCAG
GTCAGGCTGC ACCAGGCCGG CCTGGAGCTG CTGCGCGCCG TTGCCTCGCC GGATCATCCG
CTGGTCATGG TGGTCGACGA CCTGCAATGG GCAAACAAGG GCTCAATCGG CTTCATCAAC
ACACTGCTTA CGTCCGGCGA ACTGAACGGT TTCCTTCTGG TATGCGCCTA TCGCGAGACA
GAGGTAGCCC CTCTCCATCC GCTGTCTGCC CGACTGACCG CATGGCAGCG GCTTGCCGAC
GCGCCGGTGC ACCTGGGGCT GCGGAACCTG CCATGCGCCG ACCTCTCCCT GATGGTGGCG
GACATGCTCC GCCTGCGTAC AGCCGAGGCA ACGGAACTGG CGCGTTCCCT CAGTGCACGG
ACACAGGGCA ACCCCTATGA CACCATGGAA CTGCTCAATG CGCTGCGCAG GGATGGCGTG
CTGCGTCTGG GGAGGGATGG CTGGCGCTGG GACGAGGCGG CGATCCGTCG TCATGTGGGC
CAAGGTGACG TAATCGACCT GGTGGCGGCG CGCATTACCG GGATGCCGAC GGTGACACGG
GATCTGCTGG AGGTCATGGC ATGCCTGGGG AGCGAGACCC AAACCGGTCT GCTGGCAGCT
GCGACCGGCC TGAGCGCCAC CGCGTTACAG GAGGCGATCA GGCCGGCGCT GGAGGATGGG
CTGCTGGTGC TGGAGCAGGG AGAGTCCACC GGCAGCGATG GCAGCTGCCT CGTCCGCTTT
CGCCACGACC GGGTGCAGCA GGCAGCCCAT GACGGACTGG AACCGTCGCG GCGCAGCCGG
CTGCAGCTGA CCCTTGGTCG TCGTCTGGCC CGTCTGCCGG AATTCGTCTC CCTGGCGGCG
GAGCAGTACC TGGCTGCGCT GGAAATGATA ACTGCTTCGG AAGAACGCCG CTTCGTGGCC
GGGCTTTTTC ACGGGGCGGC AGGCGATGCG CGCGTCAGCG CCAACCATGG GGCAGCCGAG
CGTTTTCTGG CGGCGTCCTT GGAGCTTCTC ACCTCCCTGG GGATGAGGGG GGATGACCCG
GCCTGTGTCG CACTGGAGAC CGAATGGCAT GGCGCGCTCT ACTGCCTGGC TCGCCTGGAT
CAGGCCGACA CGGTCTTTCA CTCCCTGGAG CAACGCTGCA GCGACCCGCT GGAACTGGTT
GACGCCGCCT GCATCCAGAT CAACAGTCTC TCCAACCGCA ACCGGCAGCG GGAGGCGGTG
GCTCTGGGGC TTGAGCTGCT GCGGCGCCTG GGATTCCCTC CCCCCCGTGA CCTGGAGGGG
GAGGTGCAGC AGGGGCTGCG GGAGCTGTAC GACTGGGTCG CCGACCTGGA CGCCGAACGC
GAGCTTATGC GCCGCGAGAT CGATGAGCCG CGGATGCTGG CCGCCGCGCG GCTCCTGCAG
CGCATGGTGG CGCCGGCGTT CTTCTACGAT CCCCTGGTCA GCGCCTGGCT GACCCTCATG
TCGCGTCGCC TCTGGGCAGA GCACGGCCCC TGCCCTGCGC TTCTGGCTGG GCTTGCCGGA
GCGCCGGTGG TCACCACAGC CCTGCGCGAC GACTACGAGA CCGGCTACCG CATCGTCCGG
CTGGCCCTGC GGGTGGGAGA AGTCCACGGC TACGAGCCGG AGAGCTCCTG GGTGCGCCAC
TGCTTCGCCC TCTTCTCGGC CCACTGGGCC GAGCCGCTGG AGGGGAGCAT CGGCCAGGCT
CTTCAGGCGC GCCGGGGGCT GCTGCAGGGA GGGGATCTGC AATACGCCTG TTTCACCTTC
CACACCTCCC TGGCTGCCCT GCTGGAGTGC GGCGAGAGCC TGACGCTTCT TGTAACCGAA
CTGGAGCAGG CCCTGGCCTT TGCCCGGCGC ACCGCCAACG GCTTCTCCCT GGCCTCCTTC
CTGGCCTACC AACAGTTCGT ACGGGCGTTG CTCGGCTCGA CCGATGCTCC GGGCGGCTTT
TCCGACCATT CGTTGGACGA GGCCGCATTC TCGGCCGGAC TGGGCGAAAA CCCCGTTGCG
GCTGTTACGT TTCACATCCT GCGCGGACTG GCCGCAGCCC TGTTCGGTGA CGCGGTGGCC
CTGATCAGGC ATGCGGCACA GGCCATGCCG CTTGTGCCGC ACATCCAGGG ATTCTATCCC
GTGGCCCTGG CCCACCTGCT GCAGGCCCTG GCATGCGCGG AACGGCTCCG AAACAGCGCG
ACACCTGATG AGCGTGCCGG ACTGCTGGCT GAACTGGATG TCTGCAGGGA GTGGCTGGCA
TGCCGGGCCG AGCACGCGCC GACCAACTTC CTTCATCTGG TGAAGCTGGT GGAGGCGGAA
CGTGCCTGGG CCACGGGTGA CTGCTGGGGG AGCACCCGTT CCTTCGACGC GGCCATGACA
GAGGCGGGGA GGCGCCAAAG ACCATGGCAC CGGGCACTGG TGACCGAGCG GGCCGCCCGC
TTCCATCTGG CCCAGGGGCT GGAGCAGACC GGTCGCACCC TGCTGGGTCA GGCCCGTGAG
CTGTACCGCA GCTGGGGCGC GACCGGCAAG CTGCGCCAGC TCGAAAGAGA AGCTCCTTTC
TTCTCCACCG GGGAGGAGGG GCGGGAGTAT CCGCAGGTGG CGAGCAGCAC TCTCTCCAAC
GACGGCATCG ACCTGCTGGC CATGATGCGC GCCTCCCAGG CGCTCAGTTC CGAGACATCC
CTCCAGCGGC TGAAAGAGCG GGTGATAGAC CTGCTGGGCG CCATGACCGG AGCAACCCGG
GTGCAGCTTG TCATCCGCAC TGGCGACGGC CAGGGGTGGC ACCTGCTGGG TCCGGCGGAA
AACGGCGATA CACGGATTTC CCTGGAACAG GCTGCCGACC AGGGGCTCGT GCCGCTCTCC
GTTGTCCGCT ACGTTGAACG CACCCTGGAG CCGCTCCTGC TGCATGACGC CACCCAGGAT
GACCGCTTCT GGCTCGACCC GTACCTTACG GGGCTCGAAC GCTGCTCCCT GTTGACGGTC
CCGCTCATGA GCCATGGCGA GCCACGGGCA CTGCTGCTGC TGGAAAACAG CAGGGGGCGC
AACGCCTTTT CCCTTGACCG GCTGGATGCG GTCATGCTGC TGGCCGGCCA GCTGGCGGTC
TCCCTGGATA ACGCCCTGCT GTACGACTCC CTGGAACTGA AGGTGGCCGA ACGCACCTCA
GCCCTGGAAA GCGAGATCGT TGCCCGCAGG TCGGCCGAAG AACTCTACCG CACCCTGGTG
GAGCACTCCC CGGATGGCAT CCTGATGGTC AACCCTTGCG GCGGAGCGAT CGTCCGCTTC
AACGGCCAGG CCCACCTGCA ATTGGGATAT TCCCGGGATG AGTTCTCCCG GCTCAGTATC
GCGGACCTGG CGAAAACCGA TGCAGAACAT CTGGAGATGT TGACGGAACA GGGGGAAGTT
CGGTTCGAGA CCAGCCATCG GACCAGGCAG GGGGAGGTGC GCACCATCCA GGCACGCTTC
AAGGCGATCG ACTACGGTGG GAAGGCCATG GCCCACTGCA TCTATCGTGA CATCACCGAC
AGCAGGAAAA TGGAGCAGGA GCTGCTCAAG GCCCGCAACC TGGAATCCCT CGGCCTACTG
GCCGGCGGCA TCGCCCACGA TTTCAACAAC CTGCTGACCG CTATCTTGGG TAACATCTCC
CTGGCGCAGA TGCTCGTCCC CGGAGACGGC AAGCTGTACA AGCTGCTTAC CCAGGCTGAA
AAGACATCCC TGCGGGCAGG CATCCTGACC AGGCAACTGC TCACCTTCGC CCGGGGGGGA
GCGCCGATCA GGCAGGTCAC GGCCCTGAGC GGGTTGGTCA GGGAGTGGGC ACTCTCATCG
CTCCCCGGCA GTCAGGCCAG CTGCAGCTTC ACCATTCCGG ACGACCTCTG GCCCTGCCAG
GTTGACGAAG GGCAGATCAG CCAGGTTATC AACAACCTGG TCATCAATGC GGATCAGGCC
ATGCCGGAGG GAGGGACCAT CTCCATCAGT GCGGAAAACC TGCTGCTCGC GCCCGGCTCC
CCCCTGCCGC TGGATTCGGG CCCCTACCTG AAGATCGACG TCAGGGACGA AGGAGAGGGG
ATCCCTCCCG AGCTGATCTC CAGCGTCTTC GATCCCTATT TCACCACCAG GCAGGACCGC
TCCGGCCTGG GGTTGGCCAC CACCTACTCC ATCATGAAGA GGCATGGGGG GCTGATTACC
GTGGAGAGTG AAGCCGGGGT CGGAACGTTG TTCAGCCTCT ACCTGCCGGC CATGGCCGGG
AAGGAAGCGG AGAAGGAACA GCCGTAG
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| Protein sequence | MAMERLRHEE AIIRRLNHLE HVSRLATATS PANALVLEDG GDISLAHLIV GQRLEIPRLL
KLARQLADIV ATVHGAGVTH RDINPGNILL SAEDAAPILI DFDHATTFAE ERPPFIHHRE
IAGNLPYLAP EQTGRVGRPL DQRADLYGLG ATLYELATGT PPFSAPDPLE LIHQILTQEP
TPPVEREPRL PRQLSLIIMR LLEKEPDRRY QSAEGLAHDL ARLRDGDEQF DLGEQDFPLR
FSPPSRLVGR EQEIQALRSA LERACAGQGA CVLVSGAPGI GKTTLINELR PMVTARRGWF
VSGKFDQYRR DHASDGVAQA LRAMGCLLLA ENEDELGRYR MRILDRVGSN AGLITAALPE
FATLLGVAPA AISGDPLEAQ VRLHQAGLEL LRAVASPDHP LVMVVDDLQW ANKGSIGFIN
TLLTSGELNG FLLVCAYRET EVAPLHPLSA RLTAWQRLAD APVHLGLRNL PCADLSLMVA
DMLRLRTAEA TELARSLSAR TQGNPYDTME LLNALRRDGV LRLGRDGWRW DEAAIRRHVG
QGDVIDLVAA RITGMPTVTR DLLEVMACLG SETQTGLLAA ATGLSATALQ EAIRPALEDG
LLVLEQGEST GSDGSCLVRF RHDRVQQAAH DGLEPSRRSR LQLTLGRRLA RLPEFVSLAA
EQYLAALEMI TASEERRFVA GLFHGAAGDA RVSANHGAAE RFLAASLELL TSLGMRGDDP
ACVALETEWH GALYCLARLD QADTVFHSLE QRCSDPLELV DAACIQINSL SNRNRQREAV
ALGLELLRRL GFPPPRDLEG EVQQGLRELY DWVADLDAER ELMRREIDEP RMLAAARLLQ
RMVAPAFFYD PLVSAWLTLM SRRLWAEHGP CPALLAGLAG APVVTTALRD DYETGYRIVR
LALRVGEVHG YEPESSWVRH CFALFSAHWA EPLEGSIGQA LQARRGLLQG GDLQYACFTF
HTSLAALLEC GESLTLLVTE LEQALAFARR TANGFSLASF LAYQQFVRAL LGSTDAPGGF
SDHSLDEAAF SAGLGENPVA AVTFHILRGL AAALFGDAVA LIRHAAQAMP LVPHIQGFYP
VALAHLLQAL ACAERLRNSA TPDERAGLLA ELDVCREWLA CRAEHAPTNF LHLVKLVEAE
RAWATGDCWG STRSFDAAMT EAGRRQRPWH RALVTERAAR FHLAQGLEQT GRTLLGQARE
LYRSWGATGK LRQLEREAPF FSTGEEGREY PQVASSTLSN DGIDLLAMMR ASQALSSETS
LQRLKERVID LLGAMTGATR VQLVIRTGDG QGWHLLGPAE NGDTRISLEQ AADQGLVPLS
VVRYVERTLE PLLLHDATQD DRFWLDPYLT GLERCSLLTV PLMSHGEPRA LLLLENSRGR
NAFSLDRLDA VMLLAGQLAV SLDNALLYDS LELKVAERTS ALESEIVARR SAEELYRTLV
EHSPDGILMV NPCGGAIVRF NGQAHLQLGY SRDEFSRLSI ADLAKTDAEH LEMLTEQGEV
RFETSHRTRQ GEVRTIQARF KAIDYGGKAM AHCIYRDITD SRKMEQELLK ARNLESLGLL
AGGIAHDFNN LLTAILGNIS LAQMLVPGDG KLYKLLTQAE KTSLRAGILT RQLLTFARGG
APIRQVTALS GLVREWALSS LPGSQASCSF TIPDDLWPCQ VDEGQISQVI NNLVINADQA
MPEGGTISIS AENLLLAPGS PLPLDSGPYL KIDVRDEGEG IPPELISSVF DPYFTTRQDR
SGLGLATTYS IMKRHGGLIT VESEAGVGTL FSLYLPAMAG KEAEKEQP
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