| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3409 |
|---|
| Symbol | |
|---|
| ID | 4572334 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 3763808 |
|---|
| End bp | 3765094 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 68% |
|---|
| IMG OID | 639757468 |
|---|
| Product | amidohydrolase |
|---|
| Protein accession | YP_903059 |
|---|
| Protein GI | 118581809 |
|---|
| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.00196752 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACATCCT TCCCCATGGA TAACGACTCC TTCATCGTGG CAGCCTCGTG GCTGCTCTCT
CCCGAAGCGC CTCCCCTGGC CGGTGGCGCG CTGCTGGTGC GTCGCGGCCG TATCGGGGAC
CTGGGCACCC TGCAGCGGTT GCGGCGCGAT CACCCCGTTC CGATCATCGA CCATCCCGGC
TGCGCCATCC TGCCCGGCTT CATCAATGCC CACACCCACC TGGAGTTGAC CCATTTCCCC
AGCTGGCGCT TGCGCAGCCA GCTGGAGGAG CACCCGCAGC GCTTCGTGGA CTGGATCATC
CAGCTGATCA AGGTCAAGCG CGGCCTGACC CCCGACGACA TGCGTGCCTC GGCCCGGGAG
GGGATCCGCA TGTGCCTGGA GTCAGGAACC ACCGCGGTGG GGGAGATCGT CACGGCTCGC
ACGCTGGCGC CGCTGTACCG CGGATCCCGG CTCTCCGGCC GGCTGTTCTT CGAACTGGTG
GGACACGACA ACTCCCGCTT CCGGGAATTG CTTCGGGAGG CGGTGGAGCT TAGCGGGGAA
TCTCCGGCCG GGTCGTTCAG CGCGGGGCTC TCGCCCCATG CCCCCTACAC CCTGGGGGAG
GAGACCTTTC CGCTGATCCG GGAGGCGGCT GCGGGCGCAT CCCTGCCGCT GGCCATCCAC
TGCTCCGAAT CAACGGAGGA GACCAATTTC GTCTTCAGCA GCAGCGGCCA ACTGGCCGAG
AGATTCTACC CCTTCGTGGG GTGGGAGCGC TACCTGCCCC CGCCACGCAG ATGCAGCACC
AGCCAGCTTC TGGAGCGGGC CGGCCTGCTG ACCGATTCCA CCCTGGCCAT CCACTGCGTA
CAGGTCAGCC GCGCGGATGC CGAGATCCTG AGGAAGCGCG GCGTCAGCGT GGCCCTCTGC
CCGCGCAGCA ACGAGCGCCT GGACGTGGGG CGGGCACCGG TGGCGCTGCT GCGCAAGCTG
GGGATTCCCC TTGCCCTGGG CACCGACTCC CTGGCCAGCA ACGACTCCCT CTCCCTCTGG
GACGAGCTGC GCTTCGCCCT GGATGCCTTC GGGGACGAGC TGTCGCCGGC CGACCTCTTC
CGCATGGTCA CCCTGGGGGG CGCCACCGCC CTGGGGATCC AGGGGGACCA CGGCTCTCTG
GAGAAAGGGA AGCGGGCCGA CTTCCAGATT GTGGGGCAGG CGGGAAAACG GGAGAGCGGG
CTTGTGGAGC GGGTCATGCT GCGGGGAGTC GTGGAGGATG TGTATGTGGC CGGAGAGCGG
TTCGACGGGG AGCGGACATC GCCCTGA
|
|---|
| Protein sequence | MTSFPMDNDS FIVAASWLLS PEAPPLAGGA LLVRRGRIGD LGTLQRLRRD HPVPIIDHPG
CAILPGFINA HTHLELTHFP SWRLRSQLEE HPQRFVDWII QLIKVKRGLT PDDMRASARE
GIRMCLESGT TAVGEIVTAR TLAPLYRGSR LSGRLFFELV GHDNSRFREL LREAVELSGE
SPAGSFSAGL SPHAPYTLGE ETFPLIREAA AGASLPLAIH CSESTEETNF VFSSSGQLAE
RFYPFVGWER YLPPPRRCST SQLLERAGLL TDSTLAIHCV QVSRADAEIL RKRGVSVALC
PRSNERLDVG RAPVALLRKL GIPLALGTDS LASNDSLSLW DELRFALDAF GDELSPADLF
RMVTLGGATA LGIQGDHGSL EKGKRADFQI VGQAGKRESG LVERVMLRGV VEDVYVAGER
FDGERTSP
|
|---|
| |