| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3375 |
|---|
| Symbol | hemC |
|---|
| ID | 4571582 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3727050 |
|---|
| End bp | 3727982 |
|---|
| Gene Length | 933 bp |
|---|
| Protein Length | 310 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 639757434 |
|---|
| Product | porphobilinogen deaminase |
|---|
| Protein accession | YP_903025 |
|---|
| Protein GI | 118581775 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0181] Porphobilinogen deaminase |
|---|
| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 34 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCCCCCA GGCAGCTTCG TATCGGTACC CGCGCCAGCC AACTGGCGCT CTGGCAGGCC
AACTGGGTCA AATCCGAGCT GGAGAAGAGA TATCCCGCTA TGGAAGTGAC CCTCACCAAA
ATTAAGACCA TGGGGGACAG GATCCTTGAC GTCCCCCTGG CCCAGGTTGG CGGCAAGGGG
CTGTTCGTCA AGGAGATCGA GGAAGCCATG CTGCGGGGGG AGATCGACAT CGCCGTGCAC
AGTATGAAGG ATGTTCCCAC CGAGTTTCCC GAGGGGCTGG GGCTGTACTG CATCACGGAG
CGTGAGGACC CTCGCGACGC GGTTGTTTCC CGCGCTGCGC GGTTCTCCCA CCTGCCGCCC
GGCGCCAGGG TCGGCACCAG CGCCCTGCGC CGCCAGGCCC AGTTGCTCCA TGCCCGTCCC
GACCTGGAGA TGGTAACGAT CCGTGGCAAC GTGGAGACCC GCATCCGCAA GCTGGATGAG
GAAAACCTGG ATGCGGTCAT CCTGGCCGCC GCGGGGCTGA AGCGTCTCGG CCTCACCCAG
CGGGTGGCCG AGTACCTGGA TGTGGAGTTC TCCATTCCGG CCATCGGCCA GGGCGCCCTG
GGGATCGAGT GCCGCCTGTC TGACCCGGTC GTCACCGAGG CCATCGCATT CTTCAACCAC
CCCGACACCA GCCATGCCGT ACGGGCCGAA CGGGCCCTGC TCAGGCGCTG CCAGGGGGGA
TGCCAGGTAC CCATCGCCGC CCATGGTACG ATACGGGGGG GCGAGCTCAG GCTGGTCGGT
CTCATCGCGG CGGTGGATGG ACGGGAGTTT GTGCGCGACG AGATCAGCGG TCCGGTTGAT
CAATGTGAGC ACCTGGGGGA GGAACTGGCC GACCGCCTGC TCTCCCGGGG GGGCAGGGCA
ATTCTGGAGG AGGTTTACCA GCGTGAAATC TGA
|
|---|
| Protein sequence | MPPRQLRIGT RASQLALWQA NWVKSELEKR YPAMEVTLTK IKTMGDRILD VPLAQVGGKG
LFVKEIEEAM LRGEIDIAVH SMKDVPTEFP EGLGLYCITE REDPRDAVVS RAARFSHLPP
GARVGTSALR RQAQLLHARP DLEMVTIRGN VETRIRKLDE ENLDAVILAA AGLKRLGLTQ
RVAEYLDVEF SIPAIGQGAL GIECRLSDPV VTEAIAFFNH PDTSHAVRAE RALLRRCQGG
CQVPIAAHGT IRGGELRLVG LIAAVDGREF VRDEISGPVD QCEHLGEELA DRLLSRGGRA
ILEEVYQREI
|
|---|
| |