Gene Ppro_3349 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_3349 
Symbol 
ID4572412 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand- 
Start bp3696948 
End bp3698024 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content56% 
IMG OID639757408 
ProductCDP-glucose 4,6-dehydratase 
Protein accessionYP_902999 
Protein GI118581749 
COG category[G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0451] Nucleoside-diphosphate-sugar epimerases 
TIGRFAM ID[TIGR02622] CDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAAATC TGGTGAACCG AGAGTTCTGG AATGGCAAAT CGGTTTTTTT GACCGGCCAC 
ACCGGCTTCA AGGGAAGCTG GTTCAGTCTC TGGCTCACCA GCATGGGGGC CCAGGTGACC 
GGTTACGCAC TCCCTCCTAC AACCACACCC AATCTCTATG ACCTGGCCCG AATTGGGGAG 
TTACTGACTT CCCATAGCGC GGATGTGCGC GATTACGAGC GACTCGTATC GGCCATGCAG 
ACCGCACGTC CCGAAATTGT CTTCCACTTG GCAGCACAGC CGCTGGTGCT TGATTCATAC 
AGCAATCCCG TGGAAACCTA TTCCACAAAC ATCATGGGGA CGGTGCACCT GCTTGAGGCG 
GTTCGCCAGA CCCCCTCGGT CAGGGCCGTC GTAAATGTAA CCACCGACAA ATGCTATGAG 
AACCGGGAAT GGGTGTGGGG ATACCGTGAA AACGATTCAC TGGGAGGATA CGACCCCTAT 
TCCAGCAGCA AAGCCTGCTC CGAACTAGTC ACGTCCGCCT ACCGCTCCTC CTTTTTTAAT 
CTCAACACGT ATTCCCAGCA TGGAGTGGCA ATTGCCACCG TACGAGCAGG CAACGTCATC 
GGCGGTGGAG ACTGGGCAAA AGACAGGCTG ATCCCCGACT GCATGCGTTC CCTTTTTGCC 
GGTGAACCGA TTAACATCCG CAACCCCCAT GCCATCCGCC CCTGGCAGCA CGTGCTGGAG 
CCACTGCGAG GCTACCTGAT GCTTGCGCAG CGGCTTTACG TAGACGGCCT CGCATTTTCC 
GAGAGTTGGA ACTTCGGCCC GCTCGACTCC GATGCCAGAC CAGTTGCATG GGTCGTGGAT 
CGACTCTGCG ACCTTTGGGG TAACAATGCG CTCTATGAGT CCCGGGAAAG TTCACAGTGC 
CCCCACGAAG CTTGCTATCT GAAGCTGGAC TGTTCCAAGG CTAAAATCAG ATTGAACTGG 
AAACCATCCT GGAGCCTAGA GCAGGCGCTG CAATCCATAG TCGACTGGAC CCGTGCCTAT 
CGTTCGGGAC ACGATATGCG GTCAAAAAGC CTTGAACAGA TCCAGGCCTT TCTGTAG
 
Protein sequence
MENLVNREFW NGKSVFLTGH TGFKGSWFSL WLTSMGAQVT GYALPPTTTP NLYDLARIGE 
LLTSHSADVR DYERLVSAMQ TARPEIVFHL AAQPLVLDSY SNPVETYSTN IMGTVHLLEA 
VRQTPSVRAV VNVTTDKCYE NREWVWGYRE NDSLGGYDPY SSSKACSELV TSAYRSSFFN 
LNTYSQHGVA IATVRAGNVI GGGDWAKDRL IPDCMRSLFA GEPINIRNPH AIRPWQHVLE 
PLRGYLMLAQ RLYVDGLAFS ESWNFGPLDS DARPVAWVVD RLCDLWGNNA LYESRESSQC 
PHEACYLKLD CSKAKIRLNW KPSWSLEQAL QSIVDWTRAY RSGHDMRSKS LEQIQAFL