| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3330 |
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| Symbol | |
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| ID | 4572221 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 3667518 |
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| End bp | 3670634 |
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| Gene Length | 3117 bp |
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| Protein Length | 1038 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639757389 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_902980 |
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| Protein GI | 118581730 |
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| COG category | [R] General function prediction only
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0457] FOG: TPR repeat
[COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGGAT CTCCCTATGA ATTTGGTCGT CATACGGATT ACTCGTATGG TACTGTTGCT
ATCGGTAGAA ACAGCGCATC ACTTGAGCAT TCTTTGTACC TGAATTTACA GGAAAATACC
AAAAGAACCC CGGAAAGAAC AACAATGAAT ATCAGTTTGC ATGAAACGTC TCGGGAAAAC
GAGAGTCATT TCAGCAGGGG GCTGCGACTG CACCGGATGG GGCGACTTCA GGATGCCCTG
GCATGCTACG AACTGGCGCT TCAGGAGAGC TTTCGTCCCG ACATTCTGCT CAATATAGGG
GCATTGCTTC ATGACCTGGA GTTACACACC GAGGCTCTCC GTGTGTATGG GCGTGTTCTC
GAACTCGCCC CAGACTCCGC CCCGACATAC CATAACAGAG CAAACACGCT GCTTGCCCTG
AACCGGTGCG AGGAGGCGAT ACAGGACTAC CAGCGGGCGG CGGAGCTGAT TCCGGACAAT
CCGGAACCGT TGGTCCCCAT GGGTATGGCC TTTGAGCGAC TGCTGAGTCA CGACGAGGCA
ATGGCATGCT ACGATGCTGC CCTGAGACGC GATCCAAATT GCGCCGAGGC ACACTGGAAC
AGGGCACTTC TGCATTTGAA ACTCGGCCGT TATGAAGAGG GATGGGAGGA ATTCGAATGG
CGCTGGAAGA AGAGGGGCTA TACGACGGCT TCGCGTGATT TCGACGTGCC TGCCTGGGGA
GGCGAATCCC TTGAGCAACA GACCATCCTA GTGCATGCCG AACAGGCCTT TGGCGACACT
ATCCAGTTCG CCCGCTATCT TCCGCTCGTG GCGGAGCGGT GCGGGCGTCT CATTCTTGAG
GTTCCTCTCC CTCTCTGCGA GCTCCTGCGT ACGGTTTCCG GTGTGTCGGA CGTGCTCCCG
GTCGGTTCTC CGCTGCCTCC CTGTGACCGG CATGTACCGT TGATGAGTCT TCCCGGTGTG
TTTAGTACAA CCATAAAAAC AATTCCCCGC ACTGTTCCCT ATCTGTCTCC ACCTTCGGAA
CGCATAAAGG CTTGGCAGAA ATTGCTCGAA CCGTATTCAA CGTTCAAGGC CGGCGTTGTC
TGGGCCGGGC GCAAGACACC CGACCCCCTG CGCTCGTGTC GACTGACAGA CATTGCCCCT
TTGGCAAGCA TTCGGGGAAT CACCTTTTTC TCCCTTCAAA TGGACGACGC GGCTTCCCAG
TTCGCGTCAC CTCCACCGGG AATGACTTGT GTCGACCTGA CTGTCCATAT CCACGATTTT
GCCGATACGG CAGCCTTCAT CGCTCAACTG GATCTAGTTA TCACGATTGA TACATCGGTG
GCCCACCTGT CCGGCGCCCT GGGAAAACCG ACGTTTGTAC TCTTGCCATA CGTCGCGGAT
TGGCGTTGGA TGCTGAGACG CTCCGACTCT CCCTGGTATC CCACCATGCG ACTGTTCCGT
CAGAGCACGC GCGGCGACTG GCGTGAACCG ATACAGAAAT TGGTTGCCGC ACTGGAAGAA
TCGCTGACTG AGTCAGGCAG ATATGCACAC AGCCGTGATA CCGCTGTGCC ACCCGGCGTC
ATGGAGAGTT ACCATCGGGG AGTCGCCTTG CTGGATAGGC AACGATTTAA GGAGGCACAT
GCGCTGCTTT CGCAGGCTGT CCAGGAATCC CCCCGATGGA GCCCCCCCCT TGCTGCCCTG
GGCTTATGCT GCTACCACCA GGGCAGTGCT GCCCGGGCGG AAGAACGGTT CCGTCAAGCT
ATAGGCTACG ATGAAAACAA CGTGGATGCC TACCGCTGTC TCGGGCTCCT ACTAAACGAG
CAGGAACGAT ATGAGGAAGC AGCCTTTCTG TTCGCGACGG CTCTCTCACT TGCCCCGAAC
GACTGCGATC TCAGGCGATT CCTAGGTGAT GCGCACTTTG GTTTGGGCAA TTATGCTGAT
GCCGCCCATT GGTACAACAA TGCCCTTTCC AGACGCCCCG ATGATGTGGA GGTTTTGCTG
AACCTTGGTG CGGCAAGTGA AGTATTGAAC CGCTTTGACG TGGCGGAATG CTCGCTTCTG
AGAGCAATCG AGTTATCCCC TGGGGATCAC CGTGCGTATC TGAACCTGGG AGGAGTCTTT
CTCTCGCAGA ACCGTCTGGA GCAGGCTGAA CGGTACTTTC AAAAAGCTTT GGAATGCAAG
CCGAACGATC CGACCGTGCG ATGGAATTTG GCGCAGGTGT CATTAATCCG TGGAAACTAC
CAAAAGGGTT TTGAGGAGTT TGAAACGCGT TTCGACAAGA AGGGCCCGGT CAGGGTTGAC
CTGTGTGGTC TGCCGCTTTG GGACGGCTCT TCGCTTTCAG GAAAGACGTT GCTTGTCGTG
ACCGAGCAGG CCTTTGGAGA TGCCCTGCAG TTCTGTCGCT TTTTGCCACT ACTGGCCCAA
CAGGGAGGAA GGATTTTTCT GCGCAACAGC TTGAAACCGC TTGAAACGTT GCTGGCGACG
CTGCCGTTTC TGGAACAAAT GGTTCACCCC GGAGAAACAG TGCCCCATTG TGATTGGGCT
GTGCCGATGA TGTCGATTCC ACGCCTCCTG GGCACCACCC TGGAAACGGT GCCGAGAAAG
GTTCCCTATC TTTTTCCCGA CAGTGGGAGG TGCAGTTGGT GGCGGGAGTC TCTGCGAGAC
GATCCCGGCT TCAAGGTCGG CATTACCTGG AAAGGACGGA GCAAGCCCGA CCCCCGGCGC
TCGGCCGACA CGCACTGTTT TTCCCTTTTG CAGGACATCC GTGGGGTTTC CTGGTATTCG
TTGCAGGTTG CGGAGCGAGG GGAACAACAA CCGACATTAC CGACTGGTAT ACCACTGAGG
GATTCGGCTC ATCTGCTCAA GGATTTTTCC GACACGGCTG CGCTGATTAC TCAGCTGGAT
CTGGTGATAT CCATTGACAG CGCCGTTGCA CACCTGGCAG GTTCCCTCGG CAGGCCGACC
TGGCTCTTAT TGCCCTTTTC TCCAGACTGG CGCTGGATGC TGGAGCGGGC CGACTCTCCC
TGGTACCCCA CCATGCGACT GTTCCGCCAG CCTTCCCCTG GAACATGGCA TGCCGTATTC
AGCGACCTGG CCTCGGCACT GAGGCAGGTG CTAACAACTC AGCAACGGAA CTGTTGA
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| Protein sequence | MAGSPYEFGR HTDYSYGTVA IGRNSASLEH SLYLNLQENT KRTPERTTMN ISLHETSREN
ESHFSRGLRL HRMGRLQDAL ACYELALQES FRPDILLNIG ALLHDLELHT EALRVYGRVL
ELAPDSAPTY HNRANTLLAL NRCEEAIQDY QRAAELIPDN PEPLVPMGMA FERLLSHDEA
MACYDAALRR DPNCAEAHWN RALLHLKLGR YEEGWEEFEW RWKKRGYTTA SRDFDVPAWG
GESLEQQTIL VHAEQAFGDT IQFARYLPLV AERCGRLILE VPLPLCELLR TVSGVSDVLP
VGSPLPPCDR HVPLMSLPGV FSTTIKTIPR TVPYLSPPSE RIKAWQKLLE PYSTFKAGVV
WAGRKTPDPL RSCRLTDIAP LASIRGITFF SLQMDDAASQ FASPPPGMTC VDLTVHIHDF
ADTAAFIAQL DLVITIDTSV AHLSGALGKP TFVLLPYVAD WRWMLRRSDS PWYPTMRLFR
QSTRGDWREP IQKLVAALEE SLTESGRYAH SRDTAVPPGV MESYHRGVAL LDRQRFKEAH
ALLSQAVQES PRWSPPLAAL GLCCYHQGSA ARAEERFRQA IGYDENNVDA YRCLGLLLNE
QERYEEAAFL FATALSLAPN DCDLRRFLGD AHFGLGNYAD AAHWYNNALS RRPDDVEVLL
NLGAASEVLN RFDVAECSLL RAIELSPGDH RAYLNLGGVF LSQNRLEQAE RYFQKALECK
PNDPTVRWNL AQVSLIRGNY QKGFEEFETR FDKKGPVRVD LCGLPLWDGS SLSGKTLLVV
TEQAFGDALQ FCRFLPLLAQ QGGRIFLRNS LKPLETLLAT LPFLEQMVHP GETVPHCDWA
VPMMSIPRLL GTTLETVPRK VPYLFPDSGR CSWWRESLRD DPGFKVGITW KGRSKPDPRR
SADTHCFSLL QDIRGVSWYS LQVAERGEQQ PTLPTGIPLR DSAHLLKDFS DTAALITQLD
LVISIDSAVA HLAGSLGRPT WLLLPFSPDW RWMLERADSP WYPTMRLFRQ PSPGTWHAVF
SDLASALRQV LTTQQRNC
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