| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3326 |
|---|
| Symbol | |
|---|
| ID | 4572217 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3663112 |
|---|
| End bp | 3663783 |
|---|
| Gene Length | 672 bp |
|---|
| Protein Length | 223 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 639757385 |
|---|
| Product | MotA/TolQ/ExbB proton channel |
|---|
| Protein accession | YP_902976 |
|---|
| Protein GI | 118581726 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0811] Biopolymer transport proteins |
|---|
| TIGRFAM ID | [TIGR02796] TolQ protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.589276 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGCCCTGC TGCTTAACGC CGGTATCGTC GTCAAACTGG TCCTGATTCT GCTTTTGTTC
TTCTCGGTGG TTTCCTGGGC AATCATCCTC TTCAAACTCT TTCAGGTACA CCGCGCCAAC
AGGGAATCGG AGCGCTTCAT GGACCTGTTC TGGAAATCGT CCCGCTTCGA CACCATCGCC
TCCCAGCTTG ACCGCTTCTC CAGCTCCCCC CTCTCCGTTC TGTTCAACGA GGCTTACGCC
GAGCTCAACA AGCTGATGGA CAAAGGGGCC ACAAGCAACG GCGGGGGCTT GAGCACCGAC
CTGGGCGGCA TCGAGAACGT CTCCCGCGCC CTGCGCCGGG CCACCAACTC GGAGCTGACC
CGCCTGGAGC GCTACCTGAC CTTTCTGGCC ACCACCGGCT CCACCTCCCC CTTCATCGGC
CTGTTCGGCA CGGTGTGGGG CATCATGACC GCCTTCGAGG GGATCGGCAG GACCGGTTCC
GCCTCCCTGG CTGTCGTTGC CCCGGGCATC GCTGAGGCGT TGATCGCCAC CGCCATCGGC
CTGGTTGCCG CCATTCCGGC GGTTATGGCC TACAACCATT TTCAGCACAA GATCCGCGTC
CTGACCAACG ATATGGACAG CTTCTCCACT GAGTTCCTCA ACATCGTGCA GCGCACCGTG
GCGGGGAGAT AG
|
|---|
| Protein sequence | MALLLNAGIV VKLVLILLLF FSVVSWAIIL FKLFQVHRAN RESERFMDLF WKSSRFDTIA
SQLDRFSSSP LSVLFNEAYA ELNKLMDKGA TSNGGGLSTD LGGIENVSRA LRRATNSELT
RLERYLTFLA TTGSTSPFIG LFGTVWGIMT AFEGIGRTGS ASLAVVAPGI AEALIATAIG
LVAAIPAVMA YNHFQHKIRV LTNDMDSFST EFLNIVQRTV AGR
|
|---|
| |