Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_3233 |
Symbol | |
ID | 4573195 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 3552375 |
End bp | 3553592 |
Gene Length | 1218 bp |
Protein Length | 405 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 639757292 |
Product | RND family efflux transporter MFP subunit |
Protein accession | YP_902884 |
Protein GI | 118581634 |
COG category | [V] Defense mechanisms |
COG ID | [COG1566] Multidrug resistance efflux pump |
TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000196171 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGAAAAA CCGCGCTGAT AGCCCTAGCG CTCCTGCTGG TAGCGGGAAT CGCCATTTCC ACCTACCTGA GACGGGCGCC GGAAATCACC TACAGGACCG CCAGAATCCA ACGGGGCACC ATCGTCTCCG GCGTCTCCGC CACCGGAAAC GTCAGCGCCG TGACCACGGT CCAGGTGGGA ACCCAGGTTT CCGGCACGAT CCACAAGCTG TACGTGGACT ACAACTCCCC GGTCAAAAAG GGGCAGCCCA TCGCGGAGAT CGACCCCTCC CTGTTCAGGG CGGCGGTGGA GCAGTCCCGG GGCAACAATC TGGTTGCCAG GGCCAACCTG CAGAAGGCCA GGGTAGTGCT GGTGGACGCC GAGCGTACCA TGAAACGCAA CAGCACGCTC CTGAAGGAGG GGGTCATCTC CCAGGGTGAT TTCGACACGG CGGAAACCGC CTACCAGTCA GCCAGGGCGG CGGTGGAGGC GGCCCAGGGG ACGGTGGCCC AGACAGAGGG GGCGCTCATG CAGGCCCGCA CCAACCTGAA CTACTCCATC ATCCGCTCGC CGGTGGACGG CATCGTCATC TCCCGGGCAG TGGACGTGGG CCAGACCGTG GCGGCCTCCT TCCAGACCCC CACCCTCTTC ACCATCGCTC AGGACCTGAC CAAGATGCAG ATCGAGGTCA GCGTTGACGA GGCGGACATA AGCAGCATTA GGCAGAGCCA GACTGTGACC TTCAGCGTCG ACTCCTACCC GGAGCAATCC TTCAGGGGGA GGGTGACCCA GATCCGCAAC GCGCCGATCA TCACCCAGAA CGTGGTCACC TATGTGGTTC TGGTAACCGT GGACAACAGC GACCTGAAGC TGAAACCGGG CATGACCGCC AACGTGACCA TCGAGGTGGC CCGCAAGGCT TCCGTGCTCA GGCTTCCCCT GGCCGCCCTG CGCTTCAGGC CCAGGTCCGC GACGGACGCG GGCACGACTC CGCGGCCCAG GAACAGCACC GCCACCCGCC CTCCCCAGCA GGCCACAGGC GAGCAGCGGG TCCACATCCT CAGGGAGGGC AAGCCGGTGG CAATCGGCAT CAGGACCGGC ATCGCCGACG ACAGCGCCAT CGAGCTGACC GGAGGAGCGC TCAAAGAGGG GGATCTGGTC GTCATCGAAC AGATCGGCGG CACCGGAAAG AAGAAGGCCA ACGCAGCGGG CGGTTCCCCC ATGGGTCCGC GCTTCTAG
|
Protein sequence | MRKTALIALA LLLVAGIAIS TYLRRAPEIT YRTARIQRGT IVSGVSATGN VSAVTTVQVG TQVSGTIHKL YVDYNSPVKK GQPIAEIDPS LFRAAVEQSR GNNLVARANL QKARVVLVDA ERTMKRNSTL LKEGVISQGD FDTAETAYQS ARAAVEAAQG TVAQTEGALM QARTNLNYSI IRSPVDGIVI SRAVDVGQTV AASFQTPTLF TIAQDLTKMQ IEVSVDEADI SSIRQSQTVT FSVDSYPEQS FRGRVTQIRN APIITQNVVT YVVLVTVDNS DLKLKPGMTA NVTIEVARKA SVLRLPLAAL RFRPRSATDA GTTPRPRNST ATRPPQQATG EQRVHILREG KPVAIGIRTG IADDSAIELT GGALKEGDLV VIEQIGGTGK KKANAAGGSP MGPRF
|
| |