| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3202 |
|---|
| Symbol | |
|---|
| ID | 4573269 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 3519206 |
|---|
| End bp | 3520762 |
|---|
| Gene Length | 1557 bp |
|---|
| Protein Length | 518 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639757261 |
|---|
| Product | MFS transporter xanthine/uracil permease |
|---|
| Protein accession | YP_902853 |
|---|
| Protein GI | 118581603 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2252] Permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGCCCTACA CACCCCGCCT GTTCGCCATC GGTGACATCA ACGCCTTCTT CGGCCTGATG
CTGGACAATC TCAGCGACCT GGTGATCATG GCGGCCATCC TTACCGGCGT CTTCGGCATG
CCACGCGACC TGGTGCTGGG CAGGATGCTG CCGGGAAGCG CCATGGGGGT GCTGGCCGGG
GACCTGCTCT ACTCCTGGAT GGCCTGGCGC CTGGCCAAGC GCAGCGGGCG AGACGACGTG
ACCGCCATGC CCCTGGGGCT GGATACCCCC TCTTCCTTCG GCATGGCCTT CGGCGTCATC
GGCCCCTGCT ACCTGGCCAC GAAGGATCCC CTCCTGACCT GGCAGGTAGG CATGGCGGTG
ATCGTCATGA TGGGGCTCTT CAAGATAGTT GCCTCCTTCT TTGGACCTCT CCTGCGGCGA
TTGATCCCCC GGGCCGGCCT GCTGGGGAGC ATCGCTGCGG TGGCGCTTTT GCTCATCGCC
TACCTGCCGT TCCTCAAGCT GTTCGCCTCG CCGGTGGTCG GCTTCCTCTC ACTGGGGATC
GTCTTCATCT CGCTTTTGGC CCGCTTCAGG CTGCCCCTGC GCCTGCCCGG CGCCCTGGCC
GGCATCCTCT GCGGCGTTGT CGCCCACTAC CTGCTGGGCG CCTTCGGCCT GCTTCCCCAC
GGGATGGAGG CTCTGCCTCC CCCGCCGGAA CTGGCCTTCC ACCTGCCGCT CCCCACGTTT
GAATTCCTGG CCGGCATGAC CCGCGGACTG ACCTACCTGC CGCTGGCTAT CCCCTTTGCC
CTGGCCACGG TGGTGGGCGG GGTGGATGTG ACCGAGAGCG CGGCGGTGGC CGGCGACGAC
TACAACACCC GCGACATCCT GCTGGTGGAG GGATTCGCCA CCCTTGTGGC CGGCATGTGC
GGCGGGGTGA TCCAGTCCTG CCCTTACATC GGCCACCCGG CCTACAAGGA GATGGGGGGA
CGGGCCGGCT ACACCATTGC CACGGCGCTC TTCATCGGCC TGGGGGCGGT GTGCGGCTAC
CTCTCCTTCT TCGTGGGGCT CCTTCCCGAG GCTGCCGTGG CGCCGATCCT GATCTTCATC
GGCATCGAGA TCATGGCCCA GGCCTTCGAG GCCACGCCGC GCCAGCATTT CCGGGCCGTT
GCCATCTCCT TCATCCCGGT GGTGGCCTGC CTGGTCTCCA TCCAGTTCAA CCAGCTCTTG
TCCGGATTGG GGAAGAGCGT CTCCGATTTG TCCGGCGAGC TGCTGGTCAG CTACACCGCC
ACCACGGTCC TGGGCAACGG CTTCATCGTC ACCTCGCTCT TGTGGGGGGC GGCCTTCGCC
CATGTGCTGG ACCATTGTCC CGGCCGGGCG GCCGGGTATC TGCTGGTCTG CGCCCTGCTT
ACCCTGTGTG GCGCCATCCA TTCGCCGCTC CCCAGCGGCG CGCTCTTCTC GCCGCTGCAG
CCGCCATCGC CCCTGGTCTG GCATCTGGCA GCCGGGTACC TCCTCATGGC CCTGACCTTT
GCCCTCCTGG ATGCAGGCAG GGGCAGGCAA AAAGCATGGC AGGCCGGTCG CGGGTAA
|
|---|
| Protein sequence | MPYTPRLFAI GDINAFFGLM LDNLSDLVIM AAILTGVFGM PRDLVLGRML PGSAMGVLAG
DLLYSWMAWR LAKRSGRDDV TAMPLGLDTP SSFGMAFGVI GPCYLATKDP LLTWQVGMAV
IVMMGLFKIV ASFFGPLLRR LIPRAGLLGS IAAVALLLIA YLPFLKLFAS PVVGFLSLGI
VFISLLARFR LPLRLPGALA GILCGVVAHY LLGAFGLLPH GMEALPPPPE LAFHLPLPTF
EFLAGMTRGL TYLPLAIPFA LATVVGGVDV TESAAVAGDD YNTRDILLVE GFATLVAGMC
GGVIQSCPYI GHPAYKEMGG RAGYTIATAL FIGLGAVCGY LSFFVGLLPE AAVAPILIFI
GIEIMAQAFE ATPRQHFRAV AISFIPVVAC LVSIQFNQLL SGLGKSVSDL SGELLVSYTA
TTVLGNGFIV TSLLWGAAFA HVLDHCPGRA AGYLLVCALL TLCGAIHSPL PSGALFSPLQ
PPSPLVWHLA AGYLLMALTF ALLDAGRGRQ KAWQAGRG
|
|---|
| |