| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3161 |
|---|
| Symbol | |
|---|
| ID | 4573351 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 3470459 |
|---|
| End bp | 3471133 |
|---|
| Gene Length | 675 bp |
|---|
| Protein Length | 224 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 639757220 |
|---|
| Product | phosphate uptake regulator, PhoU |
|---|
| Protein accession | YP_902812 |
|---|
| Protein GI | 118581562 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0704] Phosphate uptake regulator |
|---|
| TIGRFAM ID | [TIGR02135] phosphate transport system regulatory protein PhoU |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.997477 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAAGAA GAGAGCACAT CAGCGCGACA TTCGACCTGG AACTGGACGA ACTGCGCAAC
AACATCCTGG CCATGGGGGG CAAGGTGGAG ATGATGATCG CCGATTCGGT GGCTGCCCTG
GCCAACCGGG ATTCGGCCCT GGCCGAGCGG ATCATCGCCA TGGACCGCGA GGTGAACGGG
CTGGAGGTGG CCATCGACGA GAAGTGCCTG CAACTTTTGG CCCTGCGCCA GCCCGCTGCC
CGGGACCTGC GCTTCATCAC CCTGGCGCTG AAGATCGTCA CCGACCTGGA GCGCATCGGC
GACCAGTGCA CCAGCGTCGC CAAACGGGTC AAGGAGCTGA ACGAGGAGCC GCCGCTCAAG
CCGTACATCG ACATCCCCCG CATGGCCCAC TGGACGGAGA CCATGGTCAG GGAGGCGCTG
GACGCCTTCG TGCGCGGCGA CGTGGATCTG GCCATCAAGG TCTGCACCGA CGACCAGACC
GTGGACGACC TGAACGTCCA GATCCAGCGC GAGCTGCTGA CCTTCATGAT CGAGGAGCCG
GCTACGATCT CCCGGGCCAT CAAGCTCAAC TACATCTCCA AGTGCCTTGA GCGCATCGCC
GACCACGCCA CCAACATCGC CGAGATGGTG ATCTTCATGG TCAAGGGGAA GGACATCCGC
CACACCATGC CGTAG
|
|---|
| Protein sequence | MERREHISAT FDLELDELRN NILAMGGKVE MMIADSVAAL ANRDSALAER IIAMDREVNG
LEVAIDEKCL QLLALRQPAA RDLRFITLAL KIVTDLERIG DQCTSVAKRV KELNEEPPLK
PYIDIPRMAH WTETMVREAL DAFVRGDVDL AIKVCTDDQT VDDLNVQIQR ELLTFMIEEP
ATISRAIKLN YISKCLERIA DHATNIAEMV IFMVKGKDIR HTMP
|
|---|
| |