| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3150 |
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| Symbol | |
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| ID | 4573444 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 3454408 |
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| End bp | 3458337 |
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| Gene Length | 3930 bp |
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| Protein Length | 1309 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639757209 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_902801 |
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| Protein GI | 118581551 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATGAAA CTGCGTTGAA GTTCATATCT GACAAAGCTG TTTTGCTGCT GACTCTTGTG
CTGTTCTGCC TGCTGCTGCC CCTTTTCAGC GCTGCCGCCG GACCATTGGA CGGCAAAAAC
GTCCTTCTGC TCCACTCCTA CCATCAGACC TATATCTTTA CCGACCAGGA AATGAAAGGG
ATCATGCGCG TACTGCGGGA GAACTACCCC GGCTGCATGC CCTATGTGGA ATACATGGAC
TGGAAGAGAT TTCCCGATGA ACGCAGAATC CCGGCCTTCA GCGAACAGCT CCGCGCAAAG
TACGCCGGCA TCAGGTTTGA CATGGTGATT GTCACCGACA ACAAGGCGCT GGAATTTGCC
GTCAAAAACC GGAGTCGGTT CTTTCCGGAG GCAGTGGTCT CCTTCAGCGG TATCAACGGC
TTCAGGCCGG CCATGCTCGA AGGGCAGAAG CGTATCAGCG GAGTGGTTGA GGATGTGGAC
CCGGCCGGCA CTATCGGGCT GATTATGGCA ACTCTCCCGG AGACACGGGA AATCGTGCTG
CTGATTGATG ACACGGAGAG CAGCAACGAG GTGCTGACAG TTGTTGAAAA GGAGATTGGA
CAGAACAAGC ATCTGCGGCT GAGCGTCTTG CGCAGTCCTG CACAGGCGGA GCTGATCTCG
GCGGTTTCCG CACTCAAGCC GGGCAGCGTG CTGCTGCAGG GGAATTTTTC CCGCGACAGG
ACCGGGCACA CCTATGAATT TGAGGATGTG CTGGCCACAA TACTGCCGCA CTGCAAGGTG
CCTGTTTTCA GCCTGTGGGA TTTCTTGGCG GGCAAGGGGA TCATGGGGGG AAGTCTGCTG
AGCGGAGAGC GGCAGGGGGA GAATGCCGCA CGCATTGCGC TTCGACTCAT GGCTGGCGAG
GATGTGCCGG TAATGGAGAG AACGCCTCCG TTGAGGATGT TGGATTATCG TCAACTCCAG
CGCTTCAATC TGGAAAAAAA CACTCCTCCG GCCGGAGTGA CGGTAATTAA CCGTCCGCAA
TCGTTTTTCC GCATCCATTT CAAATATGTC ATGGTCGGCG CCGTCATACT GTTCCTCCAG
CTTTCCGCGA TCATAGCGCT TATTGTCACA AACCGTAAAA AGCGTCGGGC GGAAAGGCTG
CTGCGCGAGA ATGAGGAGTG GTACCGCACC ATTTTTGATA TGTCCAATAA CGCTATCTTT
ATCCACGATC CGCGGACCGG GGTCATTGTT GATGTAAACG AAAGAGTTTA TGACATGTAT
GGCTACAGCC GTTCAGAATT GGCAAATGCC GACGTAAGCC TGATAAGTTC CGGCCAGCCT
TCATATGGCA TCAGTGATGC CAAGAAATGG ATCGACCGTG CGGCACATGG CGAGCCGCAG
CATTTTGAGT GGCTGGCCAG GCGTAAAGAC GGCAGCCTGT TCTGGGTTGA CGTAAGGATG
CGCCGGGTCA GCATTGGCGG CAAGGATTGC CTCCTAGTAA ACTCCAGCGA CATTACGGAG
CGCAAGCAGC AGGAAGAGGT GTCGCACGAC TCGGAAAAAC GTCTGCTGCA GATCATCGAT
TTTCTTCCCG ACGCAATCAT GGTCATTAAC CAGCAGGGGC GTGTTATTGC ATGGAACAGG
TCCATGGAAG AGCTGACAGG CGTTGCATCG GAAAACATGA TCGGCAAAGG TGATTATGAG
TACAGCATCC CTATTTACGG AAGCAGAAGG CCGGTTCTGG TAGATCTGGT GTTCATGTCA
GAGGAAGAAC GTAAGGGGAA CAAACATTAT TCGAGCATTA AAAAGGTTGG TGATTGTCTC
TATGCTGAAG GAGATTCGCT GGTAAGAGGG GAAAAACGCT CGCTCTGGGC GATTACGAGG
CCCTTGTTTG ACAGTACGGG CAATGCGGTC GGTGCCATTG AATCGGTCCG TGACGTTACT
GAACGCAAGC AGGCCAAGGA TCTGATTGTC AAGGCCAACA AGCAATTGGA GGATATCATC
GAGTTTCTGC CCGATGCGAC GCTGATCGTG AACAGCGAGA GAAAGATCAT TGCCTGGAAT
CACGCCATGG AAGAGATGAC CGGTGTTTCC AAGACAGAAG TACTGGGCGA AGAGCATTCC
GTTACCACGA TACCGTTCTA CGGTTATCGC CGGCAGTACA TCATCGACTA TATCCTTGAT
CAAAACGAAG AGCTGCTTTC AAACTACTCC TGGTTCGACC ACAGGGGTAA CACCTATAAT
GCCGAGGCGT TTGCCCCGGC GCTTTACGGT GGCAAAGGCG CCCATATCTG GGTTGCGGCC
TCTCCCATGT ATGACGATCA GGGCAATATG ATAGCGGTCA TAGAATCTGT TCGTGATATT
ACCGACCGCC GGCGGGCGGA AGAAGCCCTG CGGCGCAGTG AAGCCAACTA CCGCATGGTC
ATAGAGAATA TTCAGGATGT CTTGTACCGC GGCGACGCCG AGGGCAGGCT GATCATGGTC
AGTCCGAGCG CGCTGAAGCT TTTGGGGTGC GGATCCCTTG ACGACTTCCT GGGCAAGTCG
ATTGCGGACA CCTTCTACTT TCAGCCGGAA AAACGGAGCG AGTTCTTCGA ACTGATCAGG
CAGCATGGAA AAGTAACAAA CTACGAAGTG GAATTGAAGA AACATGATGG CACACCGGTG
ATGGTGGAAA CCAGCAGTAA TGCCTATTAT GACGAGAATG GCAACTTTGC CGGAATAGAA
GGGCTTTTCA GGGATATAAC CGAACGAAAG AAGGGCGAGC AGGAACGCAA AAAACTGGAA
GAGCAGCTGA TCCAGGCTCA GAAACTGGAG GCCATCGGAA CACTGGCCGC TGGCATAGCC
CATGATTTCA ACAACATACT CAGCGGCATC ATGGGTTATA CGGAACTGTC GCTGAACAAG
GTCAAGGAGC AGCCGAAGGT GTATCGGAAC ATGGAACAGG TGCTGACGGC CGCCAACAGG
GCCAAAGACC TGGTGAAGCA GATACTGACC TTCTGCCGCA AGGCGCACCA TGAAACGAAA
CCCACCTCTG TCATACCGAT ACTACAGGAG GTGGCCAAGT TCATGCGCGC CTCACTTCCT
GCCACGATAG AGCTGAAGCT CCGGATCGAA ACCGAATCGG ACATCATTAT TGCTGACTCC
AGTCAGTTGC ATCAGGTACT GGTAAACCTG TGCACCAATG CGGGGTATGC CATGAAGGAT
AAAGGCGGCG TTCTGGAAAT ATGCCTTGCA GATGTAACAG TCGACAGCCG TACCCTACCA
CAGGGTTCCA CGTTTGCCGC GGGGCACTGC CTGGAGCTGA GTGTCAGGGA TTCCGGCATG
GGCATTGAAC CGGAAAACCT GCCCAGAATC TTTGACCCCT ATTTTACTAC GAAGGGACCG
GGAGAGGGCA CCGGGCTGGG GCTGGCCATG GTTCATGGCA TCATCAAGAG TCATGGCGGT
GATATCAGGG TGTACAGCGA ACTGGGCAAA GGCACGGTTT TCAGGATTTA TCTGCCTCTG
ATGCGGTGGA ACAAGGGACA TGAAGAGCAG ACGGCTCACG GCATTCCCCA AGGCAACGGT
CAAAGCATTC TGCTGGTGGA TGATGAGGAG ATGCTGGTAG AGATGGGCAG GATCATGCTC
GAGGAGCTCG GATACCGTGT GACCACAGAG ACAGACCCGC TGAAGGCGGT TGAAACCATT
AAGAATACAA TGGGGGGCAT CGATCTGGTG ATAACCGACA AGACCATGCC TCACATGAGC
GGGTTTGAAC TCGCCGGGAA AATCCGTCAG CTGAGGAGCG AGTTGCCGGT TATTCTCTGT
TCGGGATTTC ATGAAATCAG TGATGTGGAA AAGAGCCGGG GCTTATGCAT CAATCAGCTG
TTACTCAAAC CGTTTGATCT CGTTACGCTG GCCAATGCCG TCCATGCGGC TCTCAAAGAG
CCACCTTTGC AAACGTTTCA AAACACGTGA
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| Protein sequence | MNETALKFIS DKAVLLLTLV LFCLLLPLFS AAAGPLDGKN VLLLHSYHQT YIFTDQEMKG
IMRVLRENYP GCMPYVEYMD WKRFPDERRI PAFSEQLRAK YAGIRFDMVI VTDNKALEFA
VKNRSRFFPE AVVSFSGING FRPAMLEGQK RISGVVEDVD PAGTIGLIMA TLPETREIVL
LIDDTESSNE VLTVVEKEIG QNKHLRLSVL RSPAQAELIS AVSALKPGSV LLQGNFSRDR
TGHTYEFEDV LATILPHCKV PVFSLWDFLA GKGIMGGSLL SGERQGENAA RIALRLMAGE
DVPVMERTPP LRMLDYRQLQ RFNLEKNTPP AGVTVINRPQ SFFRIHFKYV MVGAVILFLQ
LSAIIALIVT NRKKRRAERL LRENEEWYRT IFDMSNNAIF IHDPRTGVIV DVNERVYDMY
GYSRSELANA DVSLISSGQP SYGISDAKKW IDRAAHGEPQ HFEWLARRKD GSLFWVDVRM
RRVSIGGKDC LLVNSSDITE RKQQEEVSHD SEKRLLQIID FLPDAIMVIN QQGRVIAWNR
SMEELTGVAS ENMIGKGDYE YSIPIYGSRR PVLVDLVFMS EEERKGNKHY SSIKKVGDCL
YAEGDSLVRG EKRSLWAITR PLFDSTGNAV GAIESVRDVT ERKQAKDLIV KANKQLEDII
EFLPDATLIV NSERKIIAWN HAMEEMTGVS KTEVLGEEHS VTTIPFYGYR RQYIIDYILD
QNEELLSNYS WFDHRGNTYN AEAFAPALYG GKGAHIWVAA SPMYDDQGNM IAVIESVRDI
TDRRRAEEAL RRSEANYRMV IENIQDVLYR GDAEGRLIMV SPSALKLLGC GSLDDFLGKS
IADTFYFQPE KRSEFFELIR QHGKVTNYEV ELKKHDGTPV MVETSSNAYY DENGNFAGIE
GLFRDITERK KGEQERKKLE EQLIQAQKLE AIGTLAAGIA HDFNNILSGI MGYTELSLNK
VKEQPKVYRN MEQVLTAANR AKDLVKQILT FCRKAHHETK PTSVIPILQE VAKFMRASLP
ATIELKLRIE TESDIIIADS SQLHQVLVNL CTNAGYAMKD KGGVLEICLA DVTVDSRTLP
QGSTFAAGHC LELSVRDSGM GIEPENLPRI FDPYFTTKGP GEGTGLGLAM VHGIIKSHGG
DIRVYSELGK GTVFRIYLPL MRWNKGHEEQ TAHGIPQGNG QSILLVDDEE MLVEMGRIML
EELGYRVTTE TDPLKAVETI KNTMGGIDLV ITDKTMPHMS GFELAGKIRQ LRSELPVILC
SGFHEISDVE KSRGLCINQL LLKPFDLVTL ANAVHAALKE PPLQTFQNT
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