| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3061 |
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| Symbol | |
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| ID | 4574106 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 3349868 |
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| End bp | 3351100 |
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| Gene Length | 1233 bp |
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| Protein Length | 410 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 639757118 |
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| Product | L,L-diaminopimelate aminotransferase |
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| Protein accession | YP_902714 |
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| Protein GI | 118581464 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0436] Aspartate/tyrosine/aromatic aminotransferase |
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| TIGRFAM ID | [TIGR03542] LL-diaminopimelate aminotransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.371159 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAAGA TAAATGACAA CTACCTGAAG CTGAAAGCCG GGTACCTCTT CCCCGAAATC
GGCCGCCGCG TGCGTGCCTT TGCGGAAGCC AATCCCCAGG CCAACGTGAT CCGCCTCGGC
ATTGGCGATG TGACCAGGCC GCTCCCCCCG GCAATCCTCA AGGCATTCCA CGACGCGGTC
GACGACCTGG CCAAGGTCGA GACCTTTGCC GGCTACGGCC CGGAGCAGGG GTACGACTGG
CTGATCAACT CGGTCATCGA GAAGTCCTAC AACAAGCTGG GGGTAGAACT CAAGACCAGC
GAGATTTTTG TCTCCGACGG TTCCAAGTGC GACTGTGCCA ATATCCTGGA CATCTTCGCC
ATGGACAACG TGGTGGCCAT CGGCGATCCG GTCTACCCGG TGTACAACGA CACCAACGTC
ATGATCGGCC GCACCGGCGA GGCTGACGAC AGGGGCTACT ACAAGGGGAT CGTCTACATG
CCCTGTACCG AGGCCAACGG CTTCATTCCG ACGCTGCCCA CGGAGAAGGT GGACATCATC
TACCTCTGCT TCCCCAACAA CCCCACCGGC ACCGTGGCCA GCCGGGAGGA ACTGAAGAAG
TGGGTCGATT ACGCCATTGC CAATAACGCC GTGATCTTCT TCGATGCCGC CTACGAGGCC
TTTATCACTG ATCCGGCCAT CCCCCATTCC ATCTACGAGA TCGAGGGGGC AAAGAAGTGT
GCCATCGAGT TCCGCTCCTT CTCCAAGACC GCCGGATTCA CCGGTGTGCG CTGCGGCCTG
GTTGTGGTTC CGGAGGAGGT CATGGGCAGC ACGGCCACGG GTGAAGCCTA CAGCTTCAAC
AAACTCTGGC TGCGCCGCAC CACCACCAAG TTCAACGGCG CCTCCTATCC GGTACAGAGG
GCCGCCGCCG CGGTCTATAC CGACGAGGGC TGGGCCCAGA CCAAGGAAAT CATCGATTAC
TACATGGAGA ACGCCCGCAT CATTCGCGAA GGGCTTGCCG AGGCCGGTTG CACGGTCTAC
GGCGGGGTTA ACGCCCCCTA TATCTGGCTC AAGACCCCCG GCGGCATGAG CAGCTGGGAA
TTCTTCGACA AACTCCTGAC CGAGTGTAAC GTGGTCGGGA CCCCCGGCAG CGGCTTCGGG
CCCAGCGGGG AGGGGTTCTT CCGGCTGTCC GCCTTCGGCA ACCGGGAGAA CGTGATCGAA
GCGGTGGAGA GAATCAAGAA GAACCTGAAG TAG
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| Protein sequence | MAKINDNYLK LKAGYLFPEI GRRVRAFAEA NPQANVIRLG IGDVTRPLPP AILKAFHDAV
DDLAKVETFA GYGPEQGYDW LINSVIEKSY NKLGVELKTS EIFVSDGSKC DCANILDIFA
MDNVVAIGDP VYPVYNDTNV MIGRTGEADD RGYYKGIVYM PCTEANGFIP TLPTEKVDII
YLCFPNNPTG TVASREELKK WVDYAIANNA VIFFDAAYEA FITDPAIPHS IYEIEGAKKC
AIEFRSFSKT AGFTGVRCGL VVVPEEVMGS TATGEAYSFN KLWLRRTTTK FNGASYPVQR
AAAAVYTDEG WAQTKEIIDY YMENARIIRE GLAEAGCTVY GGVNAPYIWL KTPGGMSSWE
FFDKLLTECN VVGTPGSGFG PSGEGFFRLS AFGNRENVIE AVERIKKNLK
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