Gene Ppro_3019 details

Gene Information

• Locus tag: Ppro_3019
• Symbol: lpxD
• ID: 4574309
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 3299412
• End bp: 3300452
• Gene Length: 1041 bp
• Protein Length: 346 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 639757073
• Product: UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• Protein accession: YP_902674
• Protein GI: 118581424
• COG category: [M] Cell wall/membrane/envelope biogenesis
• COG ID: [COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase
• TIGRFAM ID: [TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 10
• Plasmid unclonability p-value: 0.00996453
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCAAACCA CGAAAACACT GAAAGAGCTG GCCGACTATC TGGGCGGGAC GGTGCGGGGT 
GACGAAACCC TCGTGGTCAA CGGCCTGGCG CCACTGGAGT CGGCCGGAGC GGACAAGATC 
ACCTTCCTGG CCAACCCCAA ATACGCCGCA AAAGTGGCCG AGACCGGCGC CGGCGCGGTG 
CTGATGGCTC CTGGCGGCGA GGCCTTTGGC CGCAACCTGA TCGAGGTGGC CACCCCCTAT 
CTGGCCTTCG CCAAGCTGCT GAACCTGTTC TACGTGCACA AACCAGCCCC CCGTGGTGTC 
ATGGAGGGGG CAAGCATCGG CGCCAACCTC ACCCTGGGAA GCGATGTCAC CATCCATCCC 
GGCGCAATGA TCGGCAACAA CGTGCGCGTC GGCGACCGCT GCGTCATCCA TAGCGGCGCG 
GTAATCTACG ACGGCGCCAG CATCGGCGAT GACTGCCTGA TCCACGCCAA CGCGGTGGTG 
CGCGAGCGCT GCCGCATCGG CAACCGCTGC GTGCTCCAGC CGGGCGCGGT GATCGGCAGC 
GACGGTTTCG GCTATGCCCC GGACGGCTCC GGCTACTACC CCATCCCCCA GATCGGCATC 
GTGGTGCTGG AGGACGACGT GGAGATCGGC GCCAACAGCT GCGTCGACCG GGCCGCCCTG 
GAGGTGACCC TGATCAGGCG CGGCACCAAG CTGGACAACC TGGTGCAGAT CGCCCACAAC 
TGCCAGATCG GCGAGGACTG CATGATCGTC TCCCAGGTGG GCATCTCCGG GAGCACCAAG 
CTGGGCAACC ACGTCACCCT GGCCGGACAG GTGGGGGTTG CCGGGCATCT CACCATCGGT 
GACAACGTCA TGATCGGCGC CCAGTCCGGC GTACCCAACT CGGTGCCGGC AAATGCCGGC 
TACAGCGGCA CGCCGATCAT GCCCCACAAG GATTGGCTGA GAGCCATGGC GGTCGTGCCC 
CGCCTGCCGG AACTGCGCAA GACCATCGGC GCCCTGGAAA AAAGAATCGC AGAACTTGAA 
GCACGCCTGG CGGAAAAATA A 

 

Protein sequence

MQTTKTLKEL ADYLGGTVRG DETLVVNGLA PLESAGADKI TFLANPKYAA KVAETGAGAV 
LMAPGGEAFG RNLIEVATPY LAFAKLLNLF YVHKPAPRGV MEGASIGANL TLGSDVTIHP 
GAMIGNNVRV GDRCVIHSGA VIYDGASIGD DCLIHANAVV RERCRIGNRC VLQPGAVIGS 
DGFGYAPDGS GYYPIPQIGI VVLEDDVEIG ANSCVDRAAL EVTLIRRGTK LDNLVQIAHN 
CQIGEDCMIV SQVGISGSTK LGNHVTLAGQ VGVAGHLTIG DNVMIGAQSG VPNSVPANAG 
YSGTPIMPHK DWLRAMAVVP RLPELRKTIG ALEKRIAELE ARLAEK