| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_3013 |
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| Symbol | |
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| ID | 4574303 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 3290201 |
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| End bp | 3292801 |
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| Gene Length | 2601 bp |
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| Protein Length | 866 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639757067 |
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| Product | ribonuclease |
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| Protein accession | YP_902668 |
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| Protein GI | 118581418 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1530] Ribonucleases G and E |
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| TIGRFAM ID | [TIGR00757] ribonuclease, Rne/Rng family |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.000305018 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAGG CCGTAAGCAA AAAGATGCTG ATCAACGTCA TGCACCCCGA AGAGGCCCGC
GTGGCCATCG TGCATGACGG ACGTCTGATG GAACTGAATA TAGAGATAAG CGGCAAGGAG
CAGACCAAGG GAAACATCTA CAAAGGGGTC GTGCTGCGCG TGGAACCGGG GCTACAGGCC
GCCTTCGTGG ACATCGGCCG CCCCAAGCCC GGCTTCCTGC AGATGGGCGA ACTGCACCCC
GACTTCTGGC AGTGGCGGGA CGACGTGCCC GAGGAGCAGC GCAAGCGCCG TCCCCGCATC
CAGGAGGTGC TGCGCCGCGG CCAGGAACTG GTGGTGCAGG TGGAGAAGGA CGAGCGCGAC
AACAAGGGCT CGGCCCTGAC CAGCTACCTC TCCCTGCCGG GGCGCTACAT GGTGCTCATG
CCGGGAAGCG ACTCCAGCGG CATCTCCCGC AAGGTGGAGC AGGAGAGCGT GCGCAAGCAG
TTGAAAGAGA TCATGGCCGG GATGAGCATC CCCGAGGGGA TCGGCTATAT CGTACGCACC
CAGGCGGTGG GGCGCACCCC CGAGGAACTG CAGAAGGACA TGGAAAACCT GCTGGCCATG
TACGAGGGGA TCAAAAAGAG CGCCACCGAG ATAAAAGGGG CCGGCGAAAT CTACCGCGAC
AAGGGGCTGA TCATCCGCTT CATCCGCGAC TACTTCTCCG ACGACATCGA CGAGGTGGTG
GTGGACAGCA AGGAGGCCTT CAACGAGGCC AGGGACTTCT TCCGCGAAAC CATGCCGGGC
TGCGAAAAGC TGGTCAAGCT GCACAAGGAG AAACGGCCGG TCTTCTCCCG CTTCCAGATC
GAGGAGCAGA TCGACCAGAT CTACGAGAAG CGGGTATCGC TCCCCTCCGG CGGCTCCCTG
ATCATCGAAC CGACCGAAGC CCTGGTCAGC ATCGACGTCA ACTCCGGGAA ATCCAGCGGC
GAGCGGGGCA TCGAGGACAC CGCCTTCAAG ACCAACATGG AGGCTGCCGA AGAGGTGGCC
CGCCAGTTAC GTCTGCGCGA CCTGGGCGGT CTGATCATGA TCGACTTCAT CGACATGCGC
GACCGCAAAC ATAACCACGA GGTGGAGAAG ACCCTCAAGC AGGCCCTCAA GATGGACAAG
GCACGGGTCA ACCTGGGGCG CATCTCCGAG TTCGGCATCC TGGAGATGTC CCGCCAGCGC
ATCGCCAAGA CCTTGAACGA CGCCATCCAC CTGGCGTGCC CCCACTGCGA GGGGCGCGGC
AAGGTCAAAT CGGTGGAGGC CATGGCGCTC TCCTTTCTGC GCAAGGTGCA TGGCGCGGCG
GCCAAGGGAA ACGTATGCGA GGTGCATGGC GGCCTGCCGC TGGAAGTGGC CTACTACCTG
CTCAACCGCA AGAAGCGGGA ACTGGCCCAG ATCGAAAATG ACTACGACAT CGAAGTAACG
GTCAAGGGGA AGACATCCTT CCTGCTCAAC CAGATGGAGC TGGAGATCGT CAAACGAGAG
AAAAAGCGGC CCGAAGAGCC GGCCAGGGAC GATGCGGACA ACGGAGAGGC GACCCAACCG
GCGCTCGCCG TCGAGACCGT CGCTGCTGTG CCCCAGGAGG GGGAGCCATC CCCGGAAAAC
GGGGCCACCG AAGGGGGCAA GAAGCGCAAA CGCCGTCGCA AGAAGAAGAA ATCAGCGACG
GAGGGCACCG CGATACCCGG ACAGACGGAG GCAGAATCTG CAACAGAGCA GTCCGAAGAG
GAGCATCCTC TGGACCAGGC GCCAGGGGAG CCCACTGCCG CCCGGCAGGC CGAGGAGCAC
GAGGTGCCCG GTGCGCCAGC GGAGGAGCAG ACTGACGAAG TAACTACGGA ACCCACCGAG
GAGGGTGAAG CGGCAGCGGC TCCCAAGAAA CGCAGACGTC GGCGCAGCCG CAAGGTGAGC
AAAGGCGCCG AGGAATCGGC AACGGCCGAG GAAAGCGATG AGACGGCGTC GGCCGCGGAA
CCGCTGGAAG TTGCCCCGGC GGAGCTGGCT GCGCCTGCCG AACCTCCGGC AGGGGAGACA
GCGACGGAAC AACCGCAAGC GCCGGAGACC GTTCCGCTGG AGACGCGCTC CTTCGAGTCC
GGCCCCCAGG AAGAGCCGGC CGTAGAAACG ACTGCAGTTG TCGCGGCAGC CGGGCCAACC
GCTGTGGAGA CGACTCCAGA AGAGGAGAGC ACCACGCAAG AAGCCGTAGC CGCAGAAACC
GCCACGGCCG AGGCTGCCTT GAAGCAGCTT GCCCCGCCCG AAGAGACTTC CGGTGAAATC
GTCGCGCCGG AGCTCCTGAC AGCGGAACTC CTCCCGGAAC AGCCAGAAAC GCCGGAACCG
GCGGCCAAAC CGAAGCGGGC CAGGGCGCCA CGGGCCAGGA AGAAGACCGT GGCAACGGAG
GAACAGCAGG CCGTCGCAAC GACGGAGGCT GTTCCCGAGA GCGCTCCCGC CGAGGCCGAA
CCAGCGGTAA AAAAACCGCG ACGGCGCACC GCGGCCAAGA AGAGCACACC CGCGGCAGAC
ACGACCGCGG AGCCTGTTAC GGAAGCACCG AAACCGGCCC CACGGAAACG TCGCACCAAA
AAAGACGAAC AAAACCAATG A
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| Protein sequence | MSKAVSKKML INVMHPEEAR VAIVHDGRLM ELNIEISGKE QTKGNIYKGV VLRVEPGLQA
AFVDIGRPKP GFLQMGELHP DFWQWRDDVP EEQRKRRPRI QEVLRRGQEL VVQVEKDERD
NKGSALTSYL SLPGRYMVLM PGSDSSGISR KVEQESVRKQ LKEIMAGMSI PEGIGYIVRT
QAVGRTPEEL QKDMENLLAM YEGIKKSATE IKGAGEIYRD KGLIIRFIRD YFSDDIDEVV
VDSKEAFNEA RDFFRETMPG CEKLVKLHKE KRPVFSRFQI EEQIDQIYEK RVSLPSGGSL
IIEPTEALVS IDVNSGKSSG ERGIEDTAFK TNMEAAEEVA RQLRLRDLGG LIMIDFIDMR
DRKHNHEVEK TLKQALKMDK ARVNLGRISE FGILEMSRQR IAKTLNDAIH LACPHCEGRG
KVKSVEAMAL SFLRKVHGAA AKGNVCEVHG GLPLEVAYYL LNRKKRELAQ IENDYDIEVT
VKGKTSFLLN QMELEIVKRE KKRPEEPARD DADNGEATQP ALAVETVAAV PQEGEPSPEN
GATEGGKKRK RRRKKKKSAT EGTAIPGQTE AESATEQSEE EHPLDQAPGE PTAARQAEEH
EVPGAPAEEQ TDEVTTEPTE EGEAAAAPKK RRRRRSRKVS KGAEESATAE ESDETASAAE
PLEVAPAELA APAEPPAGET ATEQPQAPET VPLETRSFES GPQEEPAVET TAVVAAAGPT
AVETTPEEES TTQEAVAAET ATAEAALKQL APPEETSGEI VAPELLTAEL LPEQPETPEP
AAKPKRARAP RARKKTVATE EQQAVATTEA VPESAPAEAE PAVKKPRRRT AAKKSTPAAD
TTAEPVTEAP KPAPRKRRTK KDEQNQ
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