Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2960 |
Symbol | |
ID | 4574466 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 3231168 |
End bp | 3231914 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 639757014 |
Product | 16S ribosomal RNA methyltransferase RsmE |
Protein accession | YP_902615 |
Protein GI | 118581365 |
COG category | [S] Function unknown |
COG ID | [COG1385] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | [TIGR00046] RNA methyltransferase, RsmE family |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00000379617 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGGCC GGCGCTTCAT GATCAGCTCC CGCAGCATCC AGGACAACCA TGCCTGGCTG GAGGGGGACC TGTTCAGCCA CATGGTGCGG GTACTGCGGC TGGGTCCGGG CGCATCGGTC ACCCTGGTGG ACGAGCAGGG GGCTGAACAC CGGGGATCCA TCCAACAGGT GGAGAAAGAG AGGGTCATGG TCAGGATCGC GGGATCAGTT GTTCCCGGCA ACGGCGAAGG GGAAACGCCG GCCATAACCA TCTGCCAGGC CCTTCCCAAG GGGGAGAAGA CCGATCTGAT CCTGCAGAAG GGAACCGAGC TGGGAGTGCA TGACTTCCGC CTGTTCGCCG GGTGCCGTTC CGTTGCCCGC GTACGCGAGG AACAACACAA GGGAAAGCTG GAGCGCTGGA ACAGGATCAC CGCCGAGGCG GCGCGCCAGT GCGGCAGACG ACGCATACCG GCGGTCAGCT GGTTTCCCGA CGCGGAGCGG GCGGCAGGCT CCTGCGACCA TGAGCTGCGC CTGCTGCTCT GGGAGGGGGA ACGCCGGCAA GGGCTGAAGA ACGCCCTGGA GCAGCTTCCC CGTCCCGCAT CGGCCATTGT AGCCATCGGC CCCGAGGGAG GCTTCGATCC CCGAGAGGTT CGCTGCTTCA TCGGGCACGG CTTTCTCCCC GTCAGCCTGG GGAAGAGGGT CCTGCGCACG GAAACGGCAT CCCTTGCCAT TACCGCAATA CTTCAGTATA TTTGGGGAAA CATGTAG
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Protein sequence | MSGRRFMISS RSIQDNHAWL EGDLFSHMVR VLRLGPGASV TLVDEQGAEH RGSIQQVEKE RVMVRIAGSV VPGNGEGETP AITICQALPK GEKTDLILQK GTELGVHDFR LFAGCRSVAR VREEQHKGKL ERWNRITAEA ARQCGRRRIP AVSWFPDAER AAGSCDHELR LLLWEGERRQ GLKNALEQLP RPASAIVAIG PEGGFDPREV RCFIGHGFLP VSLGKRVLRT ETASLAITAI LQYIWGNM
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