Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2881 |
Symbol | |
ID | 4573934 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 3152719 |
End bp | 3153408 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639756933 |
Product | polysaccharide export protein |
Protein accession | YP_902536 |
Protein GI | 118581286 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1596] Periplasmic protein involved in polysaccharide export |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGCAC TATGCGTTTT GCAGTATATC CTGATTGCCC TGATGTTGAC GGCATGCGCG ACAACAGTGA ACAACCCGGT CCCTGTCCAG AGTTCAATTC AAGTATCCGA CTCCAGTGCA CAGGAGTACC GGATCAGAGC CGGCGACCTT CTTGATGTCA AATTCTTCTA CAACTCCGAG CTGAATGAGC AGGTCACCGT CCGTCCCGAT GGCCGCATCT CTCTCCAGTT GGCCAACGAC CTCATGGCCG GCGGCCTGAC CCCCGCGGAA CTCACCGAAC AACTGAAAAA AAAATACGCA TCCGAAATCG ACAATCCAGA GATAACCGTC ATCGTGCGCT CATTCTCGTA CCAGAGGATT TTTGTTGACG GAGAGGTCTT CAGGGCAGGC CTCATTCCGC TGGTCGGCCA AATGACCGTT TTACAGTCAA TCACACAGGC GGGGGGGAAA AAGGATACCG CCTATCTCAA GGGTGTGATT GTCATCCGGC GAACGCCTGG CGACAAACTG GTTACCATGC AACTCAACCT GGAAGACGCA CTGGACAACA CCGACATGAC TCAGGACATC GCCCTGCTGC CCAACGACAT CGTCTTTGTC CCCAAGAGTA CCATCGCCAA CGTCAACGTG TGGGTTGATC AGTATATCCG CAGAAACATT CCCGTCTCCA TGGGATTAAG CCCGTTTTAG
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Protein sequence | MKALCVLQYI LIALMLTACA TTVNNPVPVQ SSIQVSDSSA QEYRIRAGDL LDVKFFYNSE LNEQVTVRPD GRISLQLAND LMAGGLTPAE LTEQLKKKYA SEIDNPEITV IVRSFSYQRI FVDGEVFRAG LIPLVGQMTV LQSITQAGGK KDTAYLKGVI VIRRTPGDKL VTMQLNLEDA LDNTDMTQDI ALLPNDIVFV PKSTIANVNV WVDQYIRRNI PVSMGLSPF
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