Gene Ppro_2806 details

Gene Information

• Locus tag: Ppro_2806
• Symbol: cobT
• ID: 4573673
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Pelobacter propionicus DSM 2379
• Kingdom: Bacteria
• Replicon accession: NC_008609
• Strand: +
• Start bp: 3070832
• End bp: 3071890
• Gene Length: 1059 bp
• Protein Length: 352 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 639756860
• Product: nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase
• Protein accession: YP_902463
• Protein GI: 118581213
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG2038] NaMN:DMB phosphoribosyltransferase
• TIGRFAM ID: [TIGR03160] nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase

Plasmid Coverage information

• Num covering plasmid clones: 12
• Plasmid unclonability p-value: 0.0640841
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACAGGA CTATCGTTGA AACCACTCGT GAGCGCATCA AACCGGTCAA CCGGGAACTG 
ATGCAACAGG CCCAGGCCAG GCTGGACGCA AAGACCAAGC CGCCCGGCGC CCTGGGGCGT 
TTGGAGGAGT TCGCCCGCCG CATGGTGGCC ATCAGCGGTA CGGGTTCCCC GGACACGAGC 
AAAAAAGTCA TCTACACCTT TGCCGGCGAC CACGGCGTAA CCGACGAAGG GGTGGCGCTC 
TACCCCAAGG CGGTCACCAC CCAGATGGTA TACAACTTCC TGGCCGGCGG CGCCGGAGTC 
AACGTGCTGG CTCGTCATGT GGGGGCCGAG GTGCGGGTGG TTGACGTGGG GGTGGACAAC 
GATTTCGGCG ACCTGGCCGG CGTGATCCAC CGCAAGGTGG CCCGCGGCAC GCGCAATTTC 
GCCAAGGGGC CGGCAATGAC CAGGGAGGAG ATGCTGGCCG CCATAACGGT CGGCATAGAC 
CTGGCGGAAC AGTGCAGGGT CGAGGGCATC GCCCTGGTGG GTACCGGTGA AATGGGTATC 
GGCAACACCA CCCCCTCCTC GGCCATCATC GCCGCCATCT CCGGCAAGGC GGTCCGGGAC 
GTGACCCACC GTGGCACCGG CATCGATGAC GACGCACTTG AACTAAAAAT TCGCGTTATA 
GAACAGGGGC TTGCGATCAA CCAGCCTGAC TCCACCAACC CGCTGGATGT GCTGGCCAAG 
GTGGGAGGAC TGGAGATCGC CGCCATCGCC GGCCTGGTGC TGGGCTGCGC CGCCAACGGG 
ATCCCGGTGG TCATCGATGG CTTCATCTCC ACCGCCGGTG CGCTGATCGC CTCGGAACTG 
CACCCCAACG TAGCCGACTA CATCTTCGCC GCGCACCGTT CCATGGAAAT CGGGCACAGT 
TTCATGCTGG AACGCATCGG AGTCGAGCCG ATTCTGGACC TGAACCTGCG CCTGGGCGAA 
GGCACGGGCG CCGCCCTGGC CATGTCCCTG ATCGAGGCGG GGGTCAAGAC CCTGAACGAG 
ATGGCAACCC GCGAGCAGGC CGGGGTTACC CACGAATAA 

 

Protein sequence

MNRTIVETTR ERIKPVNREL MQQAQARLDA KTKPPGALGR LEEFARRMVA ISGTGSPDTS 
KKVIYTFAGD HGVTDEGVAL YPKAVTTQMV YNFLAGGAGV NVLARHVGAE VRVVDVGVDN 
DFGDLAGVIH RKVARGTRNF AKGPAMTREE MLAAITVGID LAEQCRVEGI ALVGTGEMGI 
GNTTPSSAII AAISGKAVRD VTHRGTGIDD DALELKIRVI EQGLAINQPD STNPLDVLAK 
VGGLEIAAIA GLVLGCAANG IPVVIDGFIS TAGALIASEL HPNVADYIFA AHRSMEIGHS 
FMLERIGVEP ILDLNLRLGE GTGAALAMSL IEAGVKTLNE MATREQAGVT HE