| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2728 |
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| Symbol | |
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| ID | 4573457 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 2981239 |
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| End bp | 2983815 |
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| Gene Length | 2577 bp |
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| Protein Length | 858 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639756782 |
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| Product | response regulator receiver modulated diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s) |
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| Protein accession | YP_902386 |
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| Protein GI | 118581136 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGGGGG CGAACGAGAA AACGATGAAG ATACGTATTG TTGAGGATGA ACGTGCCCAT
GCCGAGGCTA TCTCCCGTTC GTTCGGAGCC GCGCTTCCCG ATGCGAGGGT CAGCATTTGC
GCCACGCTGG CCGAGTATCG GGCCGGCCTG GCGAGCGATC CTCCCGACAT CGTGCTGATC
GATCTGAACC TGCCCGACGG CAGTGCCCTG GAGGCCCTGA CCTGTCCCGC GGAGGAGGGA
GCCTTTCCCC TTCTGATCAT GACTGCCCAT GGCAACGAGG AGATGGCCGT GGCTGCCATG
AAGGCCGGCG CCCTGGATTA CATCGTCAAA TCGGCCCAGG CCTTCGCATG CATGCCCCAA
ACCGTTGAAC GGGCATTGCG CGAGTGGAAC CTGCTCCGGA AGCACCGCCA GGCCGAACTG
TCCCTGTGCG AAAGCGAGAG CCGCTTCCGC CGAATCCTGC AGGAAATACC CTCCATCGCC
TTCAAGGGCT ACGGTGTCGA CGGCACGGTG CGTTACTGGA ACCTGGCTTC CGAACTGTTC
TACGGCTATA GCGCCGGGGA GGCCATCGGC CGCAACCTGC TGGACCTGGT CATCCCCGAG
GGGATGCGCG CGGAGGAAAA ACGGCGCATG CTCCGCATGG CGGAAACGGG GCGGGCGGAT
CCTCCCTCCG AGCAGTGTCT GCTGCGCAGG GATGGGTCGC GCATAACGGT GCTCTCATGT
CATGCCGTTG TGCGCAGGCC GGGGGAAGCC CCTGAACTAT ACGGTTTGGA CATCGACATA
AGCGAGCGCA AGATCAACGA AGAACAGCTG GAGTACCTGG CCACCCACGA CGAACTGACC
GGGCTGGCCA ATCGGGCGCT TTTTCATGAC CGGCTTGAAC AGTCACTGCA CTATGCCAAA
CGTTCCGGCC GCATCGTTGC CGTGCTGCTC TTGGACCTGG ACCGTTTCAA GATCATCAAC
GACAGCCTCG GGCATTCCTT CGGCGACAGG CTGCTCAGCG CTGTTGCCCA GCGCCTGGAT
CGGGTCGTGC GCGATACGGA TACCGTGGCC CGACTGGGAG GCGACGAGTT CGTCCTGCTC
CTGGCGGAAG TGACCGAGCC CGACGACGTG GGGCTGCTTG CGTCCCGGAT TCTGCACGAA
CTGGCGGTCC CCCACCGGAT AGAGGGGCGG GAGATCGTCA TGAGCGCCAG CCTGGGCATC
AGCCTCTACC CCAAGGACAG CGGTGACGGC TCCACCCTGA TACGCAATGC CGATATAGCC
ATGTACCGTG CCAAACAGGA AGGGGGAGGG GTTTTCTCGT TTTACGCGCC GGAGATGAAC
CAGCGGGCCA TGGAAACCAT GGAGATCGAA AGCGCCCTGC GCCTGGCGCT GGAGCGGGGG
GAATTCACCC TGTACTATCA GCCCAAGGTG GATCTGGCCA GCGGTCGCAT CAGCGGCTGC
GAGGCCCTGA TCCGCTGGCT GCATCCCCGG CGGGGAGTGG TGGCGCCGGC CGACTTCATC
CCCCTGGCCG AGGAGACCGG ACTGATCGTT CCCATCGGCA CCTGGGTGCT GAAGGAGGCC
TGCCGTCAGG TTCGAGCATG GCAGGCCGAG GGGGTGCCCA TAGCGAACGT GGCGGTCAAC
CTCTCGGCCC GGCAGTTCCG CACGGGGGAC CTGCCGGGGC TGGTGCGGGA GGTTCTCGGG
GAAACCGGTC TCGACCCCCA TCTGCTGGAG CTGGAGATGA CCGAGAGCAT GGTCATGGCC
GATCACGCCC AGGTCGTAGC GGTCATGGAG GAGCTGACGG CTATCGGTGT TCGCCTCAGT
CTGGACGATT TCGGCACCGG CTACTCCAGT TTTGCCCACT TAAGCCACTT CCCCATCAAC
CACCTGAAGA TCGACCGCTC CTTCATCAAA CAGATCGTTA CCGATCCCAA CTCCGCCACC
ATCGCCACCT CCATCATCGC CATGGCGCAC CGCATGCGAC TGAAGGCCAT TGCCGAGGGG
GTGGAGACCG AGGCCCAGCT GGCCTACCTG CGCAAACAGG GGTGCGACGA GATCCAGGGA
TACCTGCTCA GCCGTCCGCT TCCGGCGTCG GAATATGCTG CTCTGGTGCG CCGGGATGCC
GGCTTTTCCT GCCTTTCGGC GGCAGAGCAG GGGGGAGGGC GCACGCTGCT GATCGTCCAT
GACGAGCCGC ACACCCTCGA CTCCCTGCAG CGGGCACTGG GCGGCGACGG CTACCGCATT
CTCACCGCCA GCGATGCCTT CGAGGGGCTG GAACTGCTGG CAAGGGAGAA CGTACAGGTG
GTGCTCTCCG ACCAGCGCAT GGCCAGGATC AGTGGCAGTG AGTTTTTCGA CCGGGTCAGG
GTGCTGCACC CCGATACGGT CCGTGTGGTC ATCGCGGGCC AGGCCGAGCG GGAGGCGGAC
AGCGACTCGC GGAATTGTGA TCAGCCCTAC AGCTTCCTGC TGGAGTCGTG GAGCGATGAG
CTGCTGCGCG GCCAGATCCA GGATTCGTTC CGCTGGTACG AGACCAATCT CCGCTCCCCG
CGGGAAGCCA CACTGGAATC TCCCCGCTGC CCCGCTGCCA GGGATGGAGC AGAATGA
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| Protein sequence | MKGANEKTMK IRIVEDERAH AEAISRSFGA ALPDARVSIC ATLAEYRAGL ASDPPDIVLI
DLNLPDGSAL EALTCPAEEG AFPLLIMTAH GNEEMAVAAM KAGALDYIVK SAQAFACMPQ
TVERALREWN LLRKHRQAEL SLCESESRFR RILQEIPSIA FKGYGVDGTV RYWNLASELF
YGYSAGEAIG RNLLDLVIPE GMRAEEKRRM LRMAETGRAD PPSEQCLLRR DGSRITVLSC
HAVVRRPGEA PELYGLDIDI SERKINEEQL EYLATHDELT GLANRALFHD RLEQSLHYAK
RSGRIVAVLL LDLDRFKIIN DSLGHSFGDR LLSAVAQRLD RVVRDTDTVA RLGGDEFVLL
LAEVTEPDDV GLLASRILHE LAVPHRIEGR EIVMSASLGI SLYPKDSGDG STLIRNADIA
MYRAKQEGGG VFSFYAPEMN QRAMETMEIE SALRLALERG EFTLYYQPKV DLASGRISGC
EALIRWLHPR RGVVAPADFI PLAEETGLIV PIGTWVLKEA CRQVRAWQAE GVPIANVAVN
LSARQFRTGD LPGLVREVLG ETGLDPHLLE LEMTESMVMA DHAQVVAVME ELTAIGVRLS
LDDFGTGYSS FAHLSHFPIN HLKIDRSFIK QIVTDPNSAT IATSIIAMAH RMRLKAIAEG
VETEAQLAYL RKQGCDEIQG YLLSRPLPAS EYAALVRRDA GFSCLSAAEQ GGGRTLLIVH
DEPHTLDSLQ RALGGDGYRI LTASDAFEGL ELLARENVQV VLSDQRMARI SGSEFFDRVR
VLHPDTVRVV IAGQAEREAD SDSRNCDQPY SFLLESWSDE LLRGQIQDSF RWYETNLRSP
REATLESPRC PAARDGAE
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