Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_2570 |
Symbol | |
ID | 4572398 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | + |
Start bp | 2782190 |
End bp | 2785882 |
Gene Length | 3693 bp |
Protein Length | 1230 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639756619 |
Product | SMC domain-containing protein |
Protein accession | YP_902232 |
Protein GI | 118580982 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0419] ATPase involved in DNA repair |
TIGRFAM ID | [TIGR00618] exonuclease SbcC |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAAATTC TGCGCCTCAG CTTCCGCAAC CTGAACTCCC TGGCCGGCGA CTGGGATCTG GACCTGACCC ATCCGGCCTA CGTCTCCAGC GGCATCTTCG CCATCACCGG CCCCACCGGC GCAGGCAAGA CGACCATCCT GGACGCCATC TGCCTGGCCC TCTACGGCCA GACCCCCCGC CTGGGCAGAA TCACCCAGGG CGAAAACGAG ATCATGTCCC GCCAGAGCGG CGACTGCTCC GCCGAGGTGG AATTCGAAAC CGGCCATGGC CGCTTCCGCT GCCACTGGAG CCAGCACCGC TCACGCAGGC GGCCGGACGG TCAGCTGCAG CAGCCGCGCC ACGAGATCGC CGAGGCCGAG AGCGGCAAGA TCCTGGAATC CAGGCTGAAG GGGGTGGCAA CCCGGGTCGA GGAGGTCACC GGCATGGATT TCGACCGATT CACCCGCTCC ATGCTGCTGG CCCAGGGAGG ATTCGCCGCC TTCCTGCAGG CCCGCCCTGA CGAGCGCGCC CCGATCCTGG AGCAGATCAC CGGAACCGCC ATCTACAGCC GCATCTCCAT CAAGGTACAT GAGCGCACAA CGGAAGAGCG CAACCGCCTG ACCGAGATGC GCGCCGAACT GGAGGGCATC CGGCTGCTGT CTCCCGAGGA GGAGCAGGAA CTGCTGCTGG CCAAAACCGA GCGCAAGCAG AGGGAGAGTA CCCTGAACTC CGAGGCCGGG GCGATCCGCG AGACTCTGGC CTGGCAGGAG CGGATAGCGC TCCTCCAGCA GGAACTCCTG CAACTGGACA ACGAGCAACA GGCCTTCCAA GAACGCAGAG AGGCAGCCGC GCCGCAGCTG GAGAAACTGG CCCTGGCCGG CCGCGCCCTG AAGCTGGGCG GCGACCATGC CCATCTCCTA CTGCTGAGAA GCCAGCAGCA GGAGGAGCAG ACAGAGCTGC GGACGGCGAT GGAGCGGCTC CCCCGGCTCC AATCACAATG GCAGGAAGCC TTCGAGGGGC TGGAACGGGC CGACGCCGGG TGCGCTCAGG CACGGCAGAC CCAGGAACGA GAGGCGGAGC TGATCCGGCT GACCCGTGAG CTGGACTTAA GAATCGGCGG ACTCCAGGCC CAGCTGCGGG ACCTGACCGC GGAAACGGAA GCCACACGCC GCCAGGCCAG CGGTTACCGC CTGGCCATGG AAGGGTACCA CCGTCGCATG ACCGAGAGCG GGGAAGAGCT GCGGCACGTG GCGGCCTTCC TGGAAGAGCA GCACGCCGAT GCCGGCCTGG TGGAAGCCCT GACCGGCATC GAACAGCAGC TCAAGGGCCT GGGGACGACC GTGCGGCAGC ATGACGAGAT CAGGGCAGCA CGGGAACAGC AGGCAGCAGT GTTAGAGGAC GCCACGCGCT CCTTCGCCCG GACGGAGGAG CAGTGGCACA AGGCCCATAC TGCCGCCACG GAGGCCGAAG AGCGTCTCGC AACGATCCGC GGGCAGCGCC AGGCCCTGCT GAAGGGGCGG GAGCTTAGTG CCTGGCGCGA TGAGACACAG TTCCTGGCCG GTCGCCTCAC CCGTCTGGAA AGCATCGGGC AGCTGCTGGA ACGGATCGAA GAGAACGGAC ACAGGCTGAC GGAACTCAGG GGCCGGCAGC ACGAGCTGGA ACAGCGGCAA CAGGCGCTGA TCCTCCGGGA GCGTTCACTG GCAGGGGAAT GCCAGTTGCG CGAGCGGATC GTCCGCGAGC TACAGGACAA GCTACTCCTG CTCAACCGGG TGCGCAGCCT GGAAGAGGAC CGCAAGCAGC TCGTGGATGG CGTAGCCTGC CCCCTCTGCG GCGCAACCCG ACACCCCTAC GCCGCCGGCA CTGTTCCCCA GCCTGACCAG GCGCGGCAGG AACTGGAGAC GGCGCTTGAG GAGAGTGGAA AAGCCGGGGA GCTGCTCTCC CGTGTCAGAC AGGAGCAGGT CGCCGTCCAG AAGGACCTAC AGCGGGCCGG CCAGGACCGG GGCGAGCTGG AAGCGCGCCT GCTGGATGAC CGGACAATCC GCGACAACGC CTCCCACGAA CTGGGGATCG GCCCGGAAGC GGATCAGGCC GCCGATGGCC AGGCTTGGAC GCTGCTCATC GATCGGGAGA CCCGGGCCTG CCGCGAACGG CTGGCCGAGC GGCTGGCCGT CATCAGGGAG GGGGAGCGCC AGGAAGGTGA TGAGCGCGGC GCAGGGGAAC TCGTTGAAAG GCTCAAGGGG GAACTGGCCG CGCGCGACCA GGCCCGCCTG TCCGCACGGC TGGGGCGGGA ATCGGCGCAG ACGGAGCGGA TGCGTCTGGA GCAGCAGGTT GCCGCCCTGG GCGCCGAGCG TGACCGGGTC CTGGAGGAGA TGGGGAGAGT GCTGGCGCCC TTCGGTATCC CGGAGATTGC CCCGACCGGG GGAGACGAGC TCCTGGCCGC TCTGACCGGC CGCCGCGACG CCTATGTCCG CCACCTGCGG GCCAGGGATC TCCTGGAAAG GGGACGAACC GAGTGCGCCG CCGAGGGGGA GAAGCAGCGG GCACTTTTGG CGGAGACGGA ACGGGCGCTT TGCGACAGGG AACAGCAGCT GCGGGAGATG ACTGCCCACA GGGGTGCGCT GGTGGAGCAG CGGCTGGAGC GCTATGGCGA GCGCGACCCG GACAAAGAGG AGAAACGGCT GGCCGATGCC CTGCGTCAGG CCGACAAGCG GCGCGAGCAG GCGCTGCGGG AACAGAGCCG CCTCCAGGAC GAACTCGGCG GCCTGAAGCA ACAGATCGAG AGGATGACGA GCTCCCGCGA CCGCCGTGGC GAAGAGATCT CTCGGCGGGA GGCGGCCTTC CTGGCGCAGC TTCAGGAATC GGGCTTTTCC GATGAGACAG CCTATCTGCA CGCCTGCCTG CCCCAGGAGC GCTTCGATGA ACTGACGCGC TGGGCCGATG AGCTGGCCAG GGATGAGACC TCGATCACGA CCCGCCTGCG GGACCGCCAG GAAACCCTGC GAAGGGAGAC TGAACGGAAC CTGACCGCCA AGTCGCTGGA GCAGATCCAT GAGGAGCATG CCGCCCTGGC CTCCCAGTTG GGTGAACTCC AGAAGGAACT GGGGGCGATC GACCAGCAGC TGCGCCAGCA TGCCGAACAG CTGCAACGTC ACCAGAGCCG GCTGCAGGAG ATTCGGCAGC AGGGACACGA GTGCCAGCGC TGGGAGCTGC TGCGCAGCCT GATCGGATCC AGCGATGGCA AGAAGTTCCG CAACTTCGCC CAGGGGCTGA CCTTCGAGCT GATGGTGGCC CATGCCAACC GCCAGTTGAG CAAGATGAGC GACCGCTACA TACTGGTGCG CGACACAGCC GAACCGCTGG AGTTGAACGT GATCGACAAC TACCAGGCCG GCGAGATCCG CTCCACCAAG AACCTGTCCG GCGGCGAGAG CTTCATCGTC AGCCTGGCCC TCTCCCTGGG GCTGTCCAGA ATGGCCAGCC GCAACGTGCG GGTTGATTCG CTGTTCCTGG ACGAGGGGTT CGGCACCCTG GACGAGGACG CCCTGGAGAC GGCCCTGGAA ACCCTGGCCG GTCTGCAGCA GGAGGGGAAG CTGATCGGCA TCATCTCCCA CGTGCCGGCG CTGAAGGAGC GCATCGGCGC CCGCATCCAG GTTGAGGCCG GCAACGGCGG GCGCAGCACC TTAAGCGGGC CGGGCTGCCG ACGCGTTTCC TGA
|
Protein sequence | MKILRLSFRN LNSLAGDWDL DLTHPAYVSS GIFAITGPTG AGKTTILDAI CLALYGQTPR LGRITQGENE IMSRQSGDCS AEVEFETGHG RFRCHWSQHR SRRRPDGQLQ QPRHEIAEAE SGKILESRLK GVATRVEEVT GMDFDRFTRS MLLAQGGFAA FLQARPDERA PILEQITGTA IYSRISIKVH ERTTEERNRL TEMRAELEGI RLLSPEEEQE LLLAKTERKQ RESTLNSEAG AIRETLAWQE RIALLQQELL QLDNEQQAFQ ERREAAAPQL EKLALAGRAL KLGGDHAHLL LLRSQQQEEQ TELRTAMERL PRLQSQWQEA FEGLERADAG CAQARQTQER EAELIRLTRE LDLRIGGLQA QLRDLTAETE ATRRQASGYR LAMEGYHRRM TESGEELRHV AAFLEEQHAD AGLVEALTGI EQQLKGLGTT VRQHDEIRAA REQQAAVLED ATRSFARTEE QWHKAHTAAT EAEERLATIR GQRQALLKGR ELSAWRDETQ FLAGRLTRLE SIGQLLERIE ENGHRLTELR GRQHELEQRQ QALILRERSL AGECQLRERI VRELQDKLLL LNRVRSLEED RKQLVDGVAC PLCGATRHPY AAGTVPQPDQ ARQELETALE ESGKAGELLS RVRQEQVAVQ KDLQRAGQDR GELEARLLDD RTIRDNASHE LGIGPEADQA ADGQAWTLLI DRETRACRER LAERLAVIRE GERQEGDERG AGELVERLKG ELAARDQARL SARLGRESAQ TERMRLEQQV AALGAERDRV LEEMGRVLAP FGIPEIAPTG GDELLAALTG RRDAYVRHLR ARDLLERGRT ECAAEGEKQR ALLAETERAL CDREQQLREM TAHRGALVEQ RLERYGERDP DKEEKRLADA LRQADKRREQ ALREQSRLQD ELGGLKQQIE RMTSSRDRRG EEISRREAAF LAQLQESGFS DETAYLHACL PQERFDELTR WADELARDET SITTRLRDRQ ETLRRETERN LTAKSLEQIH EEHAALASQL GELQKELGAI DQQLRQHAEQ LQRHQSRLQE IRQQGHECQR WELLRSLIGS SDGKKFRNFA QGLTFELMVA HANRQLSKMS DRYILVRDTA EPLELNVIDN YQAGEIRSTK NLSGGESFIV SLALSLGLSR MASRNVRVDS LFLDEGFGTL DEDALETALE TLAGLQQEGK LIGIISHVPA LKERIGARIQ VEAGNGGRST LSGPGCRRVS
|
| |