Gene Ppro_2514 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2514 
Symbol 
ID4572117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp2723222 
End bp2724928 
Gene Length1707 bp 
Protein Length568 aa 
Translation table11 
GC content60% 
IMG OID639756563 
Producttype IV-A pilus assembly ATPase PilB 
Protein accessionYP_902176 
Protein GI118580926 
COG category[U] Intracellular trafficking, secretion, and vesicular transport
[N] Cell motility 
COG ID[COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB 
TIGRFAM ID[TIGR02533] general secretory pathway protein E
[TIGR02538] type IV-A pilus assembly ATPase PilB 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.066963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAGTTGA GCAGGCTGGG AGAAATCCTG GTAACCAACA ACCTGATCAC CAGAGAACAG 
CTTGCCAAGG CTCTCGAAGA ACAGAAGATG TCCGGCGGGC AGGCCCGTCT CGGCACGATC
CTGGTCAAGC AGAACCTGAT CAGCGAAGAG AATCTGACGG CATTTCTCTC CAAACAGTAC
GGTGTGCCCA CGGTCAGCCT TTCCAACTAT GACGTGGATC CGGCTGTTAC CAAGATCATC
CAGTCCGAGG TTGTCCAGAA GTATCAACTG GTTCCCATCA ACCGCGTCGG GGCGACCCTG
GTCGTGGCGG TTACCGATCC CTCCAATCTC TTCGCCATCG AAGACATCAA GTTCATGACC
GGCTACAACG TGGAGATGGT CATCGCTTCG GAAAGCGATA TCAAGGCGGC CATCGACAAG
TACTACGACC AGTCCGCCTC CCTGGCCGAT GTCATGGATG ACATGAACCT GGAGGACCTG
GAGGTGGTTG ATGTCGACGA GGATGTGGAC ATCAGCTCCA TGGAGCGGGC CACGGAGGAT
GCGCCGGTGG TCAGGATGGT CAATGCCATT CTGCAGGATG CCATCAAGAA GAAAGCCAGC
GACATCCACA TCGAGCCCTA CGAGAAGCTG TTCCGGGTGC GCTACCGCAT CGACGGCGTG
CTGTACGAGG CCATGAAGCC GCCGCTGAAG CTGAAGAACG CCATTACCTC GCGCATCAAG
ATCATGGCTG AGCTGGATAT CGCCGAGCGC CGCCTCCCCC AGGACGGCCG CATCAAGATC
AAGCTGGGCG GCGGAAAGGA TATGGACTTC AGGGTCTCGG TCCTGCCGAC TCTGTTCGGC
GAGAAGATCT GCATGCGTCT ATCGGACAAG AGCAGCCTGC AGACCGATCT GACCAAGCTG
GGCTACGAGC CGGAGGCCCT GGAGAACTTC CTGCGGGAGA TTCACAAGCC CTTCGGCATG
GTGCTGGTCA CCGGTCCCAC CGGCAGTGGC AAGACCGTTT CGCTCTATTC GGCCATTGCC
GAGCTGAACA AGGTCTCCGA GAATATATCA ACCGCCGAGG ATCCGGTGGA GTTCAACTTT
GCCGGCATCA ACCAGGTCCA GATGCACGAG GACATCGGCC TCAACTTCGC CGCCGCGTTG
CGCTCCTTCC TGCGTCAGGA TCCGGATATC ATCATGATTG GCGAGATCCG CGACTTCGAA
ACCGCTGAGA TCGCCGTCAA GGCCGCCCTG ACCGGCCACC TGGTGCTCTC CACCCTGCAT
ACCAACGATG CCCCCGCCAC CATCAACCGC CTGCTGAACA TGGGCATCGA GCCGTTTCTG
GTGGCATCGG CGGTGAACCT GATCACCGCC CAGCGCCTGG CACGGCGCGT CTGCAAGGAG
TGCAAGGAGC CGGAGGATAT TCCGGTCCAG GCGCTGATCG ATGCCGGCGT GCCGCCCGAC
GAAGCCCCTG GCTATGTCTG CTACCGTGGC AAGGGGTGCC CGGTCTGTAA CGGCACCGGC
TACAAAGGGA GGGTTGGCTT CTATCAGGTC ATGCCGATGC TGGACGAGAT CCGCGAACTG
ATCCTCAACG GGGCCAATAC CGCCGAGATC AAGCGCGAAA CCATGCGGCT GGGGATCAAG
TCCATGCGCC AGTCCGGGCT CACCAAGCTC AAGGAAGGGG TTACCTCGTT CGAAGAGGTG
CTGCGGGTCA CCATCGCCGA TACCTAA
 
Protein sequence
MQLSRLGEIL VTNNLITREQ LAKALEEQKM SGGQARLGTI LVKQNLISEE NLTAFLSKQY 
GVPTVSLSNY DVDPAVTKII QSEVVQKYQL VPINRVGATL VVAVTDPSNL FAIEDIKFMT
GYNVEMVIAS ESDIKAAIDK YYDQSASLAD VMDDMNLEDL EVVDVDEDVD ISSMERATED
APVVRMVNAI LQDAIKKKAS DIHIEPYEKL FRVRYRIDGV LYEAMKPPLK LKNAITSRIK
IMAELDIAER RLPQDGRIKI KLGGGKDMDF RVSVLPTLFG EKICMRLSDK SSLQTDLTKL
GYEPEALENF LREIHKPFGM VLVTGPTGSG KTVSLYSAIA ELNKVSENIS TAEDPVEFNF
AGINQVQMHE DIGLNFAAAL RSFLRQDPDI IMIGEIRDFE TAEIAVKAAL TGHLVLSTLH
TNDAPATINR LLNMGIEPFL VASAVNLITA QRLARRVCKE CKEPEDIPVQ ALIDAGVPPD
EAPGYVCYRG KGCPVCNGTG YKGRVGFYQV MPMLDEIREL ILNGANTAEI KRETMRLGIK
SMRQSGLTKL KEGVTSFEEV LRVTIADT