| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_2149 |
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| Symbol | |
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| ID | 4575099 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | + |
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| Start bp | 2308260 |
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| End bp | 2311871 |
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| Gene Length | 3612 bp |
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| Protein Length | 1203 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639756197 |
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| Product | exodeoxyribonuclease V, beta subunit |
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| Protein accession | YP_901815 |
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| Protein GI | 118580565 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.277093 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGAGAAC TGGAACATCT GGGCATCGAG CTCTCCGGGA GAAACCTGAT CGAGGCCAGC
GCCGGCACTG GCAAGACCTA TGCCATCGCC TGCCTCTATC TTCGCCTTGT CATCGAATCC
GACCTGACTC CCGAGCAAAT CCTGGTGGTG ACCTACACCG AGGCGGCCAC CGAGGAGCTG
CGCGGCCGCA TCCGCAGCCG TATCCGCCAG GCCCTGGATA CCTTTAGCGG CACCGTTTCC
AAGGACCCCT TTCTCCTGGG GCTCGTCCAG AAGGTGAACA AGGAAGGCCC CGGCGAGGAT
ATTGCGCGAA ACCGCCTCGA CCGGGCGCTC AAATCCTTCG ATCTGGCCTC CATTTTCACC
ATTCACGGAT TCTGCCTGAG GGCGCTTCAG GACAATGCCT TCGAAAGCGG CTCTCTGTAC
GACACCGAAC TTATCACCGA CCAGGCCGAC CTGCTTCAGG AGGTCGTGGA CGATTTCTGG
CGTCGGACCT TCTTTTCAGA GCCAGCCCCC CTGCTCGGCT ACGCGCTGCG CACCAAGCTC
TCTCCCGCCT ATTCCAGCAC CTTTCTCAAG GGAATGCTGG GCAATCCCAA GCTGGAGATC
CTGCCCAATT TCGACCTCGG CAGCATCCCT AGCCTCCAGG AAGAGTGCGA GACTCTCTTT
TCCTTGGTCA AGGAGATATG GCTGAATTCG CACACCGAGA TCAGGGAACT CATCCGGAGC
GACAAGGGGC TTTCCCGGGC AAAGGGGGCG TATAACCCGG ACACCCTCCC CCCCCTTTTC
GAGGCCATGG ATGCTTATGC GCGTTCAGAC AACCCCTTTG ACCTGTTTAG CGACTTCAGC
AAGCTCTGCA CCATCGGCAT TCTGAAGGGG AAAAAGCCGA CCGGAGCTCC CCTCAGCCAC
CCCTTCTTCG ATCTCTGCGA GCAGCTGCGG CAAAGGGTCG GCCAGCGATT CCTGGCGCTC
AAGGCGGAGC TTTTGGCCTT CGCGGCCGAG CATGTAGCGG CCCGAAAAAG TGAGCGCAAC
ATACGCTTCT TCGATGACCT TTTGACCTCC CTGTACGAAG CCCTTGGTGG GCCACGCGGC
GACGATTTCG CCCTCTGCCT CAGGCAGAAA TACCGGGCCG CACTCATCGA CGAGTTTCAG
GACACCGACC CGGTACAGTT CGACATTTTC CGGAAGATCT ATGCCGATCC CGCCCACCCT
CTTTTCTTGA TCGGCGACCC CAAACAGGCC ATCTACAGCT TCCGGGGCGC CGACATCTTC
GCCTACCTCA AGGCCGCCGC CGGGGTGGAA GCGACCAGGC GCTTTACCCT GACCAGCAAC
TGGCGCTCCG CGCCGGCTCT CCTGGCCGCC TTCAATGCGC TCTTTGACAA TGATTTCAAG
CCATTCCTTT TCGGGGAGAT CGCCTACCAT TCGGTTGCAT CCGGCCTTGA GGAAGAAGGC
AACCGCTTGA CCTGGGCCGA AGCTGACGAC GCCCCACTTC AGCTCTGGTG CGTGCCGCCG
GACGAAGAGG GAAAGGCCAG CAACGTGGGC CGGGCGAACA AGAGCGTACC GATGGCGGTT
GCCGCGGAAA TCGCCCGCCT GCTGCGGGCC GGCATGGCGG GAGAGGCCCT CATTGACGGG
CGCCCCGTGC TTCCGGAGCA TATCGCGGTC ATCGTCCGGA GCCATCGGCA GGCCGGCTAC
ATTCAGGAGG CCCTCAAAAA TCTTTCCATA CCCAGCGTGA TGCGCAGCGA TGCCAGCATC
TTCACCACCC GCGAGGCTCG CCAGGTCTGC ACGCTCCTTG CCGCCCTTGC CGCCCCCGGC
AACGAATGGA AGCTACGCGC CGCCCTGGTC ACCGATATTT TCGGCCTTAC GGGAGACGAC
ATCGCCACCC TGCTGGAAGA AGAGCCGCTC TGGGAAGAGT GGCTGTCGAA GTTCCAGGAG
TACCACCAGA TCTGGCTGGA ACGGGGGTTC ATGGTGATGG TTCAAACCCT CTTGTCGCGG
GAAGGCGTAC GGGGACGGTT GCTTCGCAAG CCCGACGGGG AGCGCAGGCT CACCAACCTG
CTGCACTGCT GCGAGATCCT GCATGCAGCT TCCCAGGAGA GGAGCCTGGG ACCTGAGGGG
CTGGCGGTCT GGTTTGGCGA GCGGATCAGC GCCGGGGATG CCTCTGAAGG GTACCAGATC
CGGCTTGAGA CGGACGAGAA GGCGGTAAAG ATTCTGACCA TTCATGTCAG CAAGGGGCTG
GAGTATCCCA TCGTGTTCTG CCCCTTCCTC TGGGCTGGGG TACGGAGCGA TGAAGAGGTC
GTCACCTTCC ATGACGATTT CCGACTCGTG AAGGACTACG GCTCTGCCGA TCAGGAGCTG
CACAGGGTCC TGGCCCAGAA GGAATCGCTG GCGGAAAACC TGCGGCTGCT CTATGTGGCC
CTGACGCGGG CAAAGTTCAG ATGTTACCTG GTTACAGGGA AAATTGTCGA CAGCACCGGC
AGAAACAGAC CGGAAACGTC CCCCCTGGCC TACCTGTTCC ACGCCTCTGC AACGACACGC
AACGCCGATG ACACGGTTGG GCAGCTGGGC CAGGAGGTAA AAAAACTGTC CGCCGAAGAG
ATGGAACAGC AATTACGAGC AGTGGCCGCG CGACAGCAGG ACGCCATATC GGTCTCTTCC
ATGCCGGAGG CTGGGGGCGC CGAGCGCTAC GAGCCGTTCC ACGATGGCGG AGAACGGCTT
TCCGAAAAGA AGTTTAACGC CATGATCGAG CGCGACTGGC GGGTATCCAG CTTCACCTCG
CTCGCATCCC ACGATCTTTC GACGACGGAA CTACCGGACC GGGACGAGGC CGGGGCCAAA
GAGACGGCGC TGCCCCCCCT ACCCGAAGCC GACCCCCGGG AAAAGAGCAT CTTCACCTTT
CCCAAGGGGG CACATGCCGG GATCTTCCTG CACGAGATAT TCGAGAAGCT CGACTTTAGC
GGGAGTTCCG GTGAAAAAAC CACGGATCTG GTGGCTGCCT GCCTCAAGAA GCATTGCTTC
GGAGCTGAGT GGCAATCCAC CATCAGCGAT ATGATCGAGA ATGTCGTATC AACCCAGTTT
TCCGCGCCGG AAGGCCCCTT CTCCCTTTCC GATCTCAGGC AGGGGAAATG GCTTGCCGAG
CTGGAATTCT TCTTCCCGCT CAAATTCGTC ACCTCGAACA TCCTGAAAGA GTGCCTGGGC
TCATGGAGCT CCGGCTGTAC CGCGGTTAAC CTGCAAGCGC TGGCGCAGTC GCTGAGGTTT
CGCCCCGCCA AGGGGATGGT AAGGGGCTTC ATGGATATGG TCTTTGAGCA TGGGGGCAGA
TTCTACCTCG TTGACTGGAA ATCCAATCAC CTTGGGTACC GGGTCGAGGC CTATGGCGAA
AAGGCGCTTA CGTCGGCCAT GGATCAGAAT CTCTACTCTC TCCAGTACCT GCTGTACACG
GTCGCCCTCA ACAGATATCT GTCGCTTCGG ATCAAGGAGT ACCGGTACGA AACCCATTTC
GGCGGCGTTC TATACCTCTT TCTCCGCGGC ATGGACAGGG AGAGGGGCGA AGCGTTCGGC
GTGTTCCGGG ATACTCCGCC AGCGGGATTG ATACATGAAG TGACCAATTG CCTGATCCAG
GCTGGAGGGT AA
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| Protein sequence | MRELEHLGIE LSGRNLIEAS AGTGKTYAIA CLYLRLVIES DLTPEQILVV TYTEAATEEL
RGRIRSRIRQ ALDTFSGTVS KDPFLLGLVQ KVNKEGPGED IARNRLDRAL KSFDLASIFT
IHGFCLRALQ DNAFESGSLY DTELITDQAD LLQEVVDDFW RRTFFSEPAP LLGYALRTKL
SPAYSSTFLK GMLGNPKLEI LPNFDLGSIP SLQEECETLF SLVKEIWLNS HTEIRELIRS
DKGLSRAKGA YNPDTLPPLF EAMDAYARSD NPFDLFSDFS KLCTIGILKG KKPTGAPLSH
PFFDLCEQLR QRVGQRFLAL KAELLAFAAE HVAARKSERN IRFFDDLLTS LYEALGGPRG
DDFALCLRQK YRAALIDEFQ DTDPVQFDIF RKIYADPAHP LFLIGDPKQA IYSFRGADIF
AYLKAAAGVE ATRRFTLTSN WRSAPALLAA FNALFDNDFK PFLFGEIAYH SVASGLEEEG
NRLTWAEADD APLQLWCVPP DEEGKASNVG RANKSVPMAV AAEIARLLRA GMAGEALIDG
RPVLPEHIAV IVRSHRQAGY IQEALKNLSI PSVMRSDASI FTTREARQVC TLLAALAAPG
NEWKLRAALV TDIFGLTGDD IATLLEEEPL WEEWLSKFQE YHQIWLERGF MVMVQTLLSR
EGVRGRLLRK PDGERRLTNL LHCCEILHAA SQERSLGPEG LAVWFGERIS AGDASEGYQI
RLETDEKAVK ILTIHVSKGL EYPIVFCPFL WAGVRSDEEV VTFHDDFRLV KDYGSADQEL
HRVLAQKESL AENLRLLYVA LTRAKFRCYL VTGKIVDSTG RNRPETSPLA YLFHASATTR
NADDTVGQLG QEVKKLSAEE MEQQLRAVAA RQQDAISVSS MPEAGGAERY EPFHDGGERL
SEKKFNAMIE RDWRVSSFTS LASHDLSTTE LPDRDEAGAK ETALPPLPEA DPREKSIFTF
PKGAHAGIFL HEIFEKLDFS GSSGEKTTDL VAACLKKHCF GAEWQSTISD MIENVVSTQF
SAPEGPFSLS DLRQGKWLAE LEFFFPLKFV TSNILKECLG SWSSGCTAVN LQALAQSLRF
RPAKGMVRGF MDMVFEHGGR FYLVDWKSNH LGYRVEAYGE KALTSAMDQN LYSLQYLLYT
VALNRYLSLR IKEYRYETHF GGVLYLFLRG MDRERGEAFG VFRDTPPAGL IHEVTNCLIQ
AGG
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