Gene Ppro_2050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2050 
Symbol 
ID4573893 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand+ 
Start bp2198734 
End bp2199894 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content63% 
IMG OID639756096 
Product1-deoxy-D-xylulose 5-phosphate reductoisomerase 
Protein accessionYP_901716 
Protein GI118580466 
COG category[I] Lipid transport and metabolism 
COG ID[COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 
TIGRFAM ID[TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.197472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACAGC TTTCAATACT TGGTTCCACC GGTTCCATCG GCGTCAGCAC CCTGGAGATC 
GTTGCCGCCC ACCCGGACCG GTTCCGGGTC AGCGCCCTGA CCGCCGGAAA AAACCTGGAA 
CTTTTGGCCC GCCAGATCAG ACAGTTCTCT CCCCGCATCG CCGCCGTCGC AGCCAAGGAG 
GATGTTCCCC GCCTGGCCCA GCTCTGCGAC GGCCTGGAGG TGAAGATCGT CGGAGGGGTG 
GAAGGGCTGA TCGAGGCCGC AACAGCCGAT GAAACGGACA TGGTGGTGGC GGCCATTGTT 
GGCGCGGCCG GACTGGTTCC CACGGCAGCC GCCATCCGCG CCGGCAAGGA TATCGCCCTG 
GCCAACAAGG AGACCCTGGT CACCGCCGGG CACCTGTTCA TGGAGATGGT CAGCAGCCAC 
GGCGTCAAGC TCTACCCGGT GGACAGCGAG CACAGCGCCA TCTTCCAGTC CCTGGAGGGG 
CATCGCAGCG ATGACATCAG CAAGATCATC CTCACCGCCT CGGGCGGACC GTTTTTAAAC 
ACATCCCTGG AGCAGCTGGC CGGCGTCACG GTGGGCGATG CCCTCAACCA TCCCAACTGG 
AGCATGGGGA GAAAGATCAC CATCGACTCG GCAACCATGA TGAACAAGGG CCTGGAGGTC 
ATCGAGGCCC GCTGGCTCTT CGACGCGCCG ATGGAGAAAA TCCATATCAA CATCCATCCC 
CAAAGCATCA TCCACTCCAT GGTGGAGTAC ATCGACGGCT GCGTCATCGC CCAGCTGGGC 
ATGCCGGACA TGAAAGCGCC CATCGCCTAC GCCCTCTCCT ACCCCGAGCG GGTCGCCACC 
GGCATCAAGC CGCTGGACCT GACCACCCTC ACGGGACTCA CCTTCTTCAA ACCGGACCTG 
GAGAAATTCC GCTGCCTGGG GCTGGCCTAC CGCGCCATGG CCGACGGAGA GAGCATGCCG 
GCGGTCATGA ACGCGGCCAA CGAGATCGCC GTGGATGCCT TCCTGGAGGG GCGCATCGCT 
TTCCTGCAGA TCGCCCGGGT GATCGAGGAG ACCATGGACA GCCACATTCC TCACGATCTG 
AAGTCCATAG CAGAGGTGCT TCAGGCCGAT CAGTGGGGCC GCGACACGGC CCGTGACATC 
TGCAGGAGGC TCTCGAACTG A
 
Protein sequence
MKQLSILGST GSIGVSTLEI VAAHPDRFRV SALTAGKNLE LLARQIRQFS PRIAAVAAKE 
DVPRLAQLCD GLEVKIVGGV EGLIEAATAD ETDMVVAAIV GAAGLVPTAA AIRAGKDIAL 
ANKETLVTAG HLFMEMVSSH GVKLYPVDSE HSAIFQSLEG HRSDDISKII LTASGGPFLN 
TSLEQLAGVT VGDALNHPNW SMGRKITIDS ATMMNKGLEV IEARWLFDAP MEKIHINIHP 
QSIIHSMVEY IDGCVIAQLG MPDMKAPIAY ALSYPERVAT GIKPLDLTTL TGLTFFKPDL 
EKFRCLGLAY RAMADGESMP AVMNAANEIA VDAFLEGRIA FLQIARVIEE TMDSHIPHDL 
KSIAEVLQAD QWGRDTARDI CRRLSN