Gene Ppro_2013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_2013 
Symbol 
ID4574682 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp2162313 
End bp2163170 
Gene Length858 bp 
Protein Length285 aa 
Translation table11 
GC content65% 
IMG OID639756059 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_901679 
Protein GI118580429 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1173] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACC TGACCAGTTC ATACCTGTAC GCCGTTGTCT GGCAACGCCT GAAACGCAAC 
CGCCTGGCCC TGGCCGGCGG CTGCGTGGTG CTGCTGCTCT TCGTCGTCTC CCTGCTGGCC
CCGTTGATCG TCCCCTCCGA CCCCAACGCC ATCGATGCCT GGCATGTGCT CTCCCCCCCC
TCCTGGCAGC ACTGGTTCGG CACCGACGAA CTGGGGCGCG ACGTACTCAG TCGCATGATC
TATGGCAGCC GCATCTCCCT CAAGGTCGGC TTTGTCGCCG TGGGCATCGC CGTCTCCATC
GGCACCCTGG TGGGACTGGT CTCCGGCTAC TACCGTGGCC TGGTTGACAG CTGCCTGATG
CGCATGGTGG ACATCATGCT CTGCTTTCCC GCCTTCTTCC TGATCCTGGC GGTGATCACC
TTTCTGGAGC CTTCCATCTG GTACATCATG ATGGTCATCG GTCTGACCGG CTGGATGGGG
GTGGCGCGCA TGGTGCGGGC CGAGACCCTC TCCATCCGCG AGATGGACTA CATCACGGCG
GCCCGCTGCA TCGGCTGCTC CGACCTGCGG ATCATCTTCC GCCACATCCT GCCCAACACC
CTGTCGCCGG TGCTGGTTTC CGCCACCCTG GGGGTGGCCG GCGCCATCCT GACCGAGTCG
GCCCTCTCGT TCCTGGGCAT CGGCGTCCAG CCCCCCACCC CCAGCTGGGG CAACATCCTC
ACCTCGGGCA AGGACTACAT CGAATTTGCC TGGTGGCTCT CCTTCTTCCC CGGTCTGGCC
ATCCTGGTGA CGGTACTGGC CTACAACCTG CTGGGGGAGG GGATCAGGGA CGCCTTCGAT
CCCCGGGTGA ACCGTTGA
 
Protein sequence
MTDLTSSYLY AVVWQRLKRN RLALAGGCVV LLLFVVSLLA PLIVPSDPNA IDAWHVLSPP 
SWQHWFGTDE LGRDVLSRMI YGSRISLKVG FVAVGIAVSI GTLVGLVSGY YRGLVDSCLM
RMVDIMLCFP AFFLILAVIT FLEPSIWYIM MVIGLTGWMG VARMVRAETL SIREMDYITA
ARCIGCSDLR IIFRHILPNT LSPVLVSATL GVAGAILTES ALSFLGIGVQ PPTPSWGNIL
TSGKDYIEFA WWLSFFPGLA ILVTVLAYNL LGEGIRDAFD PRVNR