| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1976 |
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| Symbol | |
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| ID | 4571801 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 2120452 |
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| End bp | 2121837 |
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| Gene Length | 1386 bp |
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| Protein Length | 461 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 639756022 |
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| Product | sigma-54 dependent trancsriptional regulator |
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| Protein accession | YP_901642 |
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| Protein GI | 118580392 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.178847 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCTT CCCGGGCCAA AGGGGGAACG TCGAACCTGC TCTCTCCCAC CGAGGCGATC
CTGGAGAGCA TCTCCGACGG TGTCTTTACC GTTGACATGG AGTGGGTGAT CACCTCCTTC
AACCGGGCCG CCGAGGAGAT CACCGGTGTG CCGCGCAGGG AGGCCATCGG CCGCCGCTGC
GGCGAGGTGT TCCGCTCCAG CATGTGCGGC GCTGACTGCG CGTTGCAGCG CACCCTCAAG
AACGGCAAGC CGGTGATCGG CAGGTCGGGC TACATCATCG ACGCCGACGG CAACCGCATC
CCGATCAGTA TCTCCACCGC CGTGCTGCGG GATGCCGATG GACGCGTAAT CGGCGGGGCG
GAAACCTTCC GCGACCTGTC CGAAGTGGAA ACCCTGCGAC GGGAGCTGGA GGGTAAGTTC
AGCGTGGGGG ATCTCTCCAG TCGCAGCCCG CTGATGCAGC GTATCTTCGA GATCCTGCCG
GCCATAGCCG CCAGCCCCAG CACGGTCATG CTGCTGGGGG AGACCGGCAC CGGCAAGGAG
GTCATGGCGC GCACGATCCA CTCCTTGGGT TCCCACAGCC AAGGGCCGTT CATCGCGGTC
AACTGCGGCG CCCTGCCCGA TACCCTGCTG GAGTCGGAGC TGTTCGGCTA CAAGGCCGGC
GCGTTCACCG GCGCCACCCG GGACAAACCG GGCCGTTTCG CCCTGGCCAG GGGAGGGACG
ATCTTTCTGG ATGAGATCGG CGAAGTGAGC CCGGCCCTGC AGGTGCGCCT GCTGCGGGTG
CTCCAGGAGC GGAGTTTCGA GCCGCTGGGG GCGGTCACGT CCGAAACCAG CGACGCGCGG
GTAATCGTGG CCACCAACAG GGATCTTGTC GAGCAGGTGC GCAAGGGGCT CTTCCGGGAG
GATCTGTACT ATCGGGTGAA CGTGGTGCGC ATGGAACTTC CCCCCCTGCG CCGCAGGAAG
GAGGATATCC CCCTGCTGGT GAATCGCTTC ATCGAGCGGT TCAACCACCT GCAGCTGAAA
TCGGTTCCGG GGATCTCCGC CGAGGCGTTG TCGTTGCTCA TGGCCCACGA CTGGCCGGGA
AACATCCGCG AGCTGGAGAA TGCCATCGAG CGCGCCTTCA TCCTCTGCAA CGAGGGGCAG
ATCGGCATCG GCCACCTCTC CGAGGAACTG CGCGCCCACC GGGCAATGGC AGCGGAAGGC
GACGTGCGTT CAGCACACGA CATCCTGGAT GCCCAGGCTA TTCTGGCCTC CCTCGAACGT
AACAACTTCA ACCGCCTGGC TGCGGCCAGG GAACTGGGTA TTCACAAGAC GACCCTGTTT
CGCAGGATGA AGCGGCTCGG CATCCCCCTC CCCGAGGAGG ACGGTCGATC GCGGCATGCC
ACCTGA
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| Protein sequence | MTASRAKGGT SNLLSPTEAI LESISDGVFT VDMEWVITSF NRAAEEITGV PRREAIGRRC
GEVFRSSMCG ADCALQRTLK NGKPVIGRSG YIIDADGNRI PISISTAVLR DADGRVIGGA
ETFRDLSEVE TLRRELEGKF SVGDLSSRSP LMQRIFEILP AIAASPSTVM LLGETGTGKE
VMARTIHSLG SHSQGPFIAV NCGALPDTLL ESELFGYKAG AFTGATRDKP GRFALARGGT
IFLDEIGEVS PALQVRLLRV LQERSFEPLG AVTSETSDAR VIVATNRDLV EQVRKGLFRE
DLYYRVNVVR MELPPLRRRK EDIPLLVNRF IERFNHLQLK SVPGISAEAL SLLMAHDWPG
NIRELENAIE RAFILCNEGQ IGIGHLSEEL RAHRAMAAEG DVRSAHDILD AQAILASLER
NNFNRLAAAR ELGIHKTTLF RRMKRLGIPL PEEDGRSRHA T
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