Gene Ppro_1901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1901 
Symbol 
ID4572518 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand
Start bp2049771 
End bp2050373 
Gene Length603 bp 
Protein Length200 aa 
Translation table11 
GC content49% 
IMG OID639755948 
ProductSOS-response transcriptional repressor, LexA 
Protein accessionYP_901569 
Protein GI118580319 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases) 
TIGRFAM ID[TIGR00498] SOS regulatory protein LexA 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGCCC TATCTCCGCG ACAAAAGCAG GTTCTTGAAT TCATCAGGGG ATATGTTGCC 
CAGAACGAGT ATCCCCCATC ATTGCGCGAT ATTGGCAATT ACATTGGGGT ATCCGGCAAT
ACGGCTGTCC TTAGTCACTT GGAAGCTTTG GAACGTAAAG GACACATCCG CCGCGATACA
GGCAGCTCAC GGAGGATTGT GTTAATTCGT GATAAACAGC ATGAGGTCTT ACAGATACCG
ATTGTCGGAA CGGTTCAGGC CGGAATACCG ACTCTTGCTG TCGAGAGCAT CGAAGGGTAT
TACCCGATGG AAAAGATGCA ACTCAGAGGC GGCACCTTCT TCCTCCGGGT CAAGGGTGAT
TCCATGATTA ACGATGCCAT CATGGACGGC GACCTTGCCT TGATTCGACC ACAGGAAACA
GCGGAAAACG GTGATATAGT CGTTGCCTTA ATTGAAGACG AGGCAACCCT GAAGAGGTTT
TATCGCGAGG GGGACTTTAT TCGGTTAGAG CCAAGCAATA CCAACTTTGC AGTAATCGTC
ATTTCTGCCA AAGATGTTAC CATTATCGGC AAGGCCATCA AGATTGTCCG CGACATCGAC
TAA
 
Protein sequence
MEALSPRQKQ VLEFIRGYVA QNEYPPSLRD IGNYIGVSGN TAVLSHLEAL ERKGHIRRDT 
GSSRRIVLIR DKQHEVLQIP IVGTVQAGIP TLAVESIEGY YPMEKMQLRG GTFFLRVKGD
SMINDAIMDG DLALIRPQET AENGDIVVAL IEDEATLKRF YREGDFIRLE PSNTNFAVIV
ISAKDVTIIG KAIKIVRDID