| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1885 |
|---|
| Symbol | |
|---|
| ID | 4571692 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2036718 |
|---|
| End bp | 2037218 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 639755932 |
|---|
| Product | DNA repair protein RadC |
|---|
| Protein accession | YP_901553 |
|---|
| Protein GI | 118580303 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2003] DNA repair proteins |
|---|
| TIGRFAM ID | [TIGR00608] DNA repair protein radc |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATATGA AGGAATTATT CCAGGAAGAC GGCCCGGATT GTCGCACCAA GACACTGCGG
TTGCGGGTAA TGAGACCCGT CTTCAGCAGG GAAGTTATCC GGGAGGATAT GCCGGACTAT
ATTGACACTA AAAGGTTTAC CTCACCACTT CAGGTGTTCG AGATGTTCCG GGACCTAGTA
ATTGAGACGA AGGAGCACTT TCTATGCCTC CACCTCGATG GAAAGAATCG GATTGTCTGT
CTGGATCGAG TATCAGTTGG CAGTCTAAAT CAGAGCATTG TCAATGTCAG AGAAGTCCTG
AAATCTGCAC TCCTGAGTTC TGCTGCGGCG ATTCTGCTGG TCCATAATCA CCCTTCCGGT
GATCCGACTC CCAGCGGTGA AGATATTGCC ATTACCAGAC GTCTCAAAGA ATCGGGAGAA
CTGATCTGCA TTCCGGTGCT CGATCATATC ATCATTGGCG ATGGTCAGTA TGTCTCTTTC
GTAGAGAGGG GGCTGTTATG A
|
|---|
| Protein sequence | MNMKELFQED GPDCRTKTLR LRVMRPVFSR EVIREDMPDY IDTKRFTSPL QVFEMFRDLV
IETKEHFLCL HLDGKNRIVC LDRVSVGSLN QSIVNVREVL KSALLSSAAA ILLVHNHPSG
DPTPSGEDIA ITRRLKESGE LICIPVLDHI IIGDGQYVSF VERGLL
|
|---|
| |