Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ppro_1874 |
Symbol | |
ID | 4574615 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pelobacter propionicus DSM 2379 |
Kingdom | Bacteria |
Replicon accession | NC_008609 |
Strand | - |
Start bp | 2015460 |
End bp | 2017571 |
Gene Length | 2112 bp |
Protein Length | 703 aa |
Translation table | 11 |
GC content | 38% |
IMG OID | 639755922 |
Product | hypothetical protein |
Protein accession | YP_901543 |
Protein GI | 118580293 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.75491 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATATAT CTTGTTTATC AATTCGGAAC TTCAGGAACT TCAAAAGTGC CCAACTGCAT TTTAGAAAAG GTATCAATAC TATCATTGGA GAAAATGGCT CTGGCAAAAC AAATCTTTTT TTCTCTTTAC GGATTTTGAT TGATAACACC CTGCCGAGAT ATTTCAAATT TTATCAAACT GATTTTAATA GGGTGTTGGA TAGTTGGGCC GGGCATTGGA TTATTATTTC AATAACATTT GACGGATTAG ACACAAGCGA AGAAGCCCAG GCATTAGCGA TACAGTCAAG TGGACATATG GAAACAGCCA CACAAGGAAG CTATTCGGTA TATTTCAGGC CGAAATACCA ATTTAGAAAA GAACTTTACG AATACTCTCA GGTTGAAGGC AAGGATTCAG CAGGATTGAA ACTTTTGTTG GATAAGCTGG CAATTGAAGA TTATGAAACC GTCTATTTAT GCAGGAGTAC GGCGGATTTC AGCATAGATG ATATTTATAA AAAGTACGTT GGTGATTTTG ACAAGATTGA ATTCCCAGAC CCTGATGATA AAGAAGAATT GATATTCGGG ACATGGTTAC CCAAAGAAAT CAATATCCAC AACGAATTGT CCTGCACATT CATTAAAGCA CTTAGAGACG TTGAAAGCGA TTTACGTTCC TATTCAAGTA ACCCACTAAT AAGCCTTTTA AGAGGAAAAG AAAAGACCGT TGAAATTACT AAACAGCACG AGATTATAGA GAGTATTGAC CAGCTGAACG AACAAATCAG TTCGCTCGAT GAAGTGATGG AAGTAAAGAA CGGTATTGAT AAGAGCATTA AGGAAACGGT TGGTACTACC TATGCACCAA ATATCGACAT AAAGTCCGAA CTTCCAAATG AAATGGAGAA ACTGTTCCAA TCGTTAAAAC TATGGATTGG CGACCCAGAC GAAGATGGTC ACAAAGGGAG AATATCGGAA TTGAGTTTGG GAGGTGCTAA CATCATTTAT CTGTCCTTAA AGTTGTTGGA ATATGAAAAA GTTAAGACCG ACAGGATTGC AAATTTCCTT TTGGTCGAAG AACCGGAAGC ACACGTTCAC ACTCATATTC AAAAAACCCT TTTTAACAAT CTGAAAGAGA ACAAAACCCA AGTCATTGTA TCAACTCATT CCACTCATAT CTCGTCAGTA AGCAATATAA GCCAAGTCAA TATATTGAGT CGTGGTGACA AAGAGGCTCA AATATTTTAT CCGTCAAAAG GTCTGGACAA AGACGAAATT ATAAGAATTG AGCGATACCT TGATGCAGTT AGAAGTAATT TACTATTTGC GAAAGGTGTT GTTTTGGTTG AAGGTGATGC GGAACAGATA TTGATTCCAG AGATGTTCAA AAAAGTCTTT GGGCTTTCTT TGGATGAAAT CGGTGTAAGC TTAATAAATA TAGGTAGTAC CGGCTTCGAA AACGTCGCGA GGATTTTTCA TCCTGACAGG GTAAGGAAAA ACTGTTCCAT TCTCACGGAT GATGATACGT CCATCGTGAC ACTTCCTGCA GACCCTAAAA CCGACACCGA GTACCAGGCT CATTGTAGAG CATCAGAGAA AAGTGGAAAA GAAAGGAAAC TTCGACTTAC AGATTTTTGC AAAGGAAACA CATATATAAA GCCGATTTAT GCAAAGTATA CGTTTGAAGT TGATTTCCTT ATGAACTCTA ACAGCTATGA ATTTGCCAAT TGCTTGGATT CGATTTATAA GCAAGGCGCT GCGATTGATA AGGCAAAAGA AAAACTTGAA AACAAGTCAG TAGAGATTGC TGGTGTCGAA GTTTTAAGGA TTGCGGGCAA GCATGGTAAA GGGTGGTTGG CTTTATTGGT AGCGGAACAA CTTGTATATA ACACTTTCAT TCCAAAATAT ATTCTTGAAG CCATAGCATT TGCTGCTGCG CATATTAATA TATCCTCTAA AGCAAAGGCG GTACTGCATC GCATTAAACA TATTCAGGAA CACGATGGCA ATTCGCTTCA GGAAAAGGCC AAAGACTTTG ACGTTAAGGA TAAATCACAT GAAGAGATTG TTTCCGCTTT CATTGCTGAT TTCAAAAACG ACCAACTTAC AACCTTTTTA GCATTCCTAT GA
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Protein sequence | MHISCLSIRN FRNFKSAQLH FRKGINTIIG ENGSGKTNLF FSLRILIDNT LPRYFKFYQT DFNRVLDSWA GHWIIISITF DGLDTSEEAQ ALAIQSSGHM ETATQGSYSV YFRPKYQFRK ELYEYSQVEG KDSAGLKLLL DKLAIEDYET VYLCRSTADF SIDDIYKKYV GDFDKIEFPD PDDKEELIFG TWLPKEINIH NELSCTFIKA LRDVESDLRS YSSNPLISLL RGKEKTVEIT KQHEIIESID QLNEQISSLD EVMEVKNGID KSIKETVGTT YAPNIDIKSE LPNEMEKLFQ SLKLWIGDPD EDGHKGRISE LSLGGANIIY LSLKLLEYEK VKTDRIANFL LVEEPEAHVH THIQKTLFNN LKENKTQVIV STHSTHISSV SNISQVNILS RGDKEAQIFY PSKGLDKDEI IRIERYLDAV RSNLLFAKGV VLVEGDAEQI LIPEMFKKVF GLSLDEIGVS LINIGSTGFE NVARIFHPDR VRKNCSILTD DDTSIVTLPA DPKTDTEYQA HCRASEKSGK ERKLRLTDFC KGNTYIKPIY AKYTFEVDFL MNSNSYEFAN CLDSIYKQGA AIDKAKEKLE NKSVEIAGVE VLRIAGKHGK GWLALLVAEQ LVYNTFIPKY ILEAIAFAAA HINISSKAKA VLHRIKHIQE HDGNSLQEKA KDFDVKDKSH EEIVSAFIAD FKNDQLTTFL AFL
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