| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1864 |
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| Symbol | |
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| ID | 4574605 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pelobacter propionicus DSM 2379 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008609 |
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| Strand | - |
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| Start bp | 2006218 |
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| End bp | 2008404 |
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| Gene Length | 2187 bp |
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| Protein Length | 728 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639755912 |
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| Product | RecD/TraA family helicase |
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| Protein accession | YP_901533 |
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| Protein GI | 118580283 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAGC CCAATTCGCT TGATACCCCT GTCGAACGCC TCTCCGGTTC AGTTGAACGG
GTCACCTTCC ACAGTGAAGA ATCCGGCTTC TGTGTGCTCC GTACCAAAGT CAAGGGACAG
CGGGAACTGA TTACCGTTAT CGGTTCCGCT GCATCCATCA CCCCCGGTGA ATACATTGAG
TGCATTGGTA TCTGGACAAA CGACCGAACC CACGGACTAC AATTCAAAGC CAACCAGTTG
AAAGTCGTAC CACCAAGCAC ACTTGAAGGA ATTGAGAAAT ATCTCGGCTC AGGGATGGTC
AAGGGAATTG GTCCTCACTT CGCCAAGATT CTCGTCAAAG CTTTCAAAGA GGATGTCTTC
ACCGTAATCG AATCTGAACC AGAGAAGCTG CTTACTCTTC CCGGTATCGG TCGAAAGCGC
ATGGAGAAGG TGACAAGTGC CTGGTCCGAA CAGAAAGTCA TTCGTGAAAT CATGGTCTTC
CTTCAATCGC ACGGAATCGG AACAGGACGA GCGGTCAGGA TATACAAGAC CTATGGCGAC
GAATCCATTC TCAAGGTAAC TGAAAACCCT TACAGACTCG CACTGGATAT TCACGGTATT
GGTTTCAAGA CCGCAGACAC TCTTGCCATG AAGCTGGGGA TCGCTGCTGA TTCACTTATT
CGCGCTCAAG CCGGTGTCCG TCATGTTCTT CAGGAAATTG CAGATGATGG ACATTGTGCT
GCGCCATGGG TTGACTTGGT TAAATCTGCA GCCGAACTTT TGGAAATACC AGCAAGCATT
ATAGAAGAGG CCATTCATGC TGAAATTGCA GAAGAGAACC TTATCCAGGA GGATATTGAA
GGCTCAGCCT GTCTCTTCCT GATCCCTCTG TTTCGTGCTG AATCCGGAAC CGCTACAAGC
ATCACCCGGC TCCTACGGGG AACACCTCCC TGGGGAGTAA TTGATGCAGA AAAGGCTATT
CCCTGGGTAG AAGCAAAGAC CGGCCTGACA CTATCCAGTT CCCAACGTGA TGCCGTCATT
TTAGCTCTCA ACAGCAAAGT CGTGGTTATT ACCGGTGGTC CTGGTGTTGG CAAAACGACC
CTGGTCAACA GCATACTGCT CACGATCCAG GCAAAGCAGA TGAGGGTTAC TCTCTGTGCA
CCGACCGGAC GTGCTGCCAA AAGATTGTCG GAATCAACCG GTATTGAGGC AAAGACCATC
CACCGCTTGC TGGAGTTCGA CCCGCAGTCA TTCGGATTCA AGCGAAATAA AGATAATCCG
CTGGAAACCG ACCTGGTGGT TATAGACGAA TCTTCAATGG TTGATATAGC CTTGATGAAT
AAGCTTCTGG CTGCCGTTCC AACCAATGCA GCTCTGATGA TTGTTGGAGA CGTTGACCAA
CTCCCCTCTG TCGGTCCCGG CTCCGTGCTT TCGGATATCA TTGATTCGGG AGTAGTGCCT
ACTGTGAGGC TTACGGAGAT ATTCCGTCAA GCAGCAAATT CACGCATCAT CGTCAATGCC
CACCGAATCA ATAAGGGTGA GATGCCTCTC AAAGCCGAAG GCACCGAACT ATCGGACTTT
TATTTCATTC CGACCAATAC TCCGGAAGAA ATCCATGACA AACTCATTCA GGTTGTCACA
GAGCGTATCC CCAAGAGATT TGGTCTTCAT CCGGTGAAAG ATATCCAGGT GCTTACCCCA
ACGAATCGTG GCGGTCTTGG TGCGCATTCA TTGAATGCCG AGTTGCAGAA GGCGCTAAAC
GAAAAGGCGG AACCAAAAGT CACACGATTC GGCACCACCT TTGCTCCCGA CGACAAGGTC
ATCCAGACGG TGAACAACTA CGATAAAGAG GTGTTCAACG GTGACATCGG TCAGATTACT
GAGATTGATG TCGAAGAAGG ATTATTACAG GTTGATTATG ATGGCAGAAC TGTTGAATAC
GAGTTCGGCG AACTGGATGA GGTTTCTCTG GCCTATGCCA CCAGCATCCA TAAAAGCCAG
GGATCGGAAT ACCCAGCGGT GGTGATTCCT TTGGCCATGC AGCATTACAC GCTGTTGGAG
CGCAATCTGA TATACACTGC CGTCACCAGG GGAAAGAAGC TCGTGACGAT CATCGGTCAA
CCAAAGGCGC TAGCAATGGC GGTCAAGAAC CGGAAGTCGA ATAAGCGACT GACTAAGCTG
GCTTCTAGAA TATCAGAATC CGGGTAA
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| Protein sequence | MKQPNSLDTP VERLSGSVER VTFHSEESGF CVLRTKVKGQ RELITVIGSA ASITPGEYIE
CIGIWTNDRT HGLQFKANQL KVVPPSTLEG IEKYLGSGMV KGIGPHFAKI LVKAFKEDVF
TVIESEPEKL LTLPGIGRKR MEKVTSAWSE QKVIREIMVF LQSHGIGTGR AVRIYKTYGD
ESILKVTENP YRLALDIHGI GFKTADTLAM KLGIAADSLI RAQAGVRHVL QEIADDGHCA
APWVDLVKSA AELLEIPASI IEEAIHAEIA EENLIQEDIE GSACLFLIPL FRAESGTATS
ITRLLRGTPP WGVIDAEKAI PWVEAKTGLT LSSSQRDAVI LALNSKVVVI TGGPGVGKTT
LVNSILLTIQ AKQMRVTLCA PTGRAAKRLS ESTGIEAKTI HRLLEFDPQS FGFKRNKDNP
LETDLVVIDE SSMVDIALMN KLLAAVPTNA ALMIVGDVDQ LPSVGPGSVL SDIIDSGVVP
TVRLTEIFRQ AANSRIIVNA HRINKGEMPL KAEGTELSDF YFIPTNTPEE IHDKLIQVVT
ERIPKRFGLH PVKDIQVLTP TNRGGLGAHS LNAELQKALN EKAEPKVTRF GTTFAPDDKV
IQTVNNYDKE VFNGDIGQIT EIDVEEGLLQ VDYDGRTVEY EFGELDEVSL AYATSIHKSQ
GSEYPAVVIP LAMQHYTLLE RNLIYTAVTR GKKLVTIIGQ PKALAMAVKN RKSNKRLTKL
ASRISESG
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