| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1859 |
|---|
| Symbol | |
|---|
| ID | 4574600 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | + |
|---|
| Start bp | 2001971 |
|---|
| End bp | 2003254 |
|---|
| Gene Length | 1284 bp |
|---|
| Protein Length | 427 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 639755907 |
|---|
| Product | phage integrase family protein |
|---|
| Protein accession | YP_901528 |
|---|
| Protein GI | 118580278 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG4974] Site-specific recombinase XerD |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.0222826 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAACCG GAACTCGTTT TACTGATAAA TTTATTATGA GTCTGAAACC GGCAGATAAG
GAGTATTGGA AGAGGGAGGG GCAGGGATTC TCAATTCGTG TTTATCCTTC TGGCGAAAAA
GCCTGGTATT TTATCTATAC ATTTGATGGG CGAAAAAAAT ACATGCGCTT AAAAGATGGG
GGCTATCCCG ACGTTTCACT GGCAGATGCA AGAGAAGCAT TCGACATCGC TAAGGTTAAG
TTGAAAAATG GAATCGACCC CCTCGCAGAA CTCGAACAGG CAAGACTTGA CCGTAAGCAT
ACGCCGTTTG TGAAAGAGTT TGTTGACGAG TTTATCAGAA TTTACTGTAA AGAGAATAAT
CGGGGGTGGA AAGAAATCGA ACGCGCATTA AAATCAGAGA TAGTTCCGAG ATGGGGAAAG
CGAAAACTGA CTGACATCAA ACGACGAGAC CTTGTCCTTG TGTTGGATGA AATCAAAGAA
CGAGGCGCAC CTGTAATGGC AAATCGGATT CTTGCGTATA CCCGCAAAAT GTTTTCGTGG
GCATTAGAGC GCGCTGCTCT GGAAGTTAAC CCATTTCTTA TGATGAGTAG GCCGAATGAT
GAAACATCAA GGGAAAGGGT ATTATCTGAA AAAGAGATTA AGACCTTTTG GCATAACCTC
GATGAATGTA AAATGAGTGA CAGCATCAAA AGAGCATTAA AGTTGATACT TGTAACGGGT
CAGCGCCCTG GGGAAATTAT TGGCATGCAC CGTAACGAAA TTGATGGTGA ATGGTGGGAG
ATTCCTGCCG CACGTTCCAA GAACAAACAG GCGCATCGTG TTTTCCTGAC AATAACAGCT
AAACAGCTAA TTGGTGATGC GTCTGGATTT ATTTTTGAAT CACCAGCTAA TCCAGCTAAA
CCTGACGAAA CGCCTCCAAA GCCTGCCAAA CCTTATGAAG TTAGAACCAT GACCCACGAC
ATAAAGCAGA ATCTTCCGCA TACGCCTCAC AGTAAGGTGA TTGACCGTCT AAAGGTACCG
CATTTTACTC CTCATGATTT GCGCCGAACT GCCGCGACTA GATGGGCAGA AATGGAGATT
ACCGGTGATA TGATTGACCG GTTACAGAAC CACATTACAA GGCAAAAGCA GGGTGTTGGC
CATGTTTACA ATCGTTACTC GTACGCTAGG GAAAAACAGC AGGCACTTGA AGCATGGGAG
CAAAAGCTTA ACAGTATCAT CACCAGCATC GGATCAGACA GCGTGGTCCT GATCGACAAA
GACAGCGACA CAAATGCCGC GTAA
|
|---|
| Protein sequence | MATGTRFTDK FIMSLKPADK EYWKREGQGF SIRVYPSGEK AWYFIYTFDG RKKYMRLKDG
GYPDVSLADA REAFDIAKVK LKNGIDPLAE LEQARLDRKH TPFVKEFVDE FIRIYCKENN
RGWKEIERAL KSEIVPRWGK RKLTDIKRRD LVLVLDEIKE RGAPVMANRI LAYTRKMFSW
ALERAALEVN PFLMMSRPND ETSRERVLSE KEIKTFWHNL DECKMSDSIK RALKLILVTG
QRPGEIIGMH RNEIDGEWWE IPAARSKNKQ AHRVFLTITA KQLIGDASGF IFESPANPAK
PDETPPKPAK PYEVRTMTHD IKQNLPHTPH SKVIDRLKVP HFTPHDLRRT AATRWAEMEI
TGDMIDRLQN HITRQKQGVG HVYNRYSYAR EKQQALEAWE QKLNSIITSI GSDSVVLIDK
DSDTNAA
|
|---|
| |