| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1858 |
|---|
| Symbol | |
|---|
| ID | 4574599 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 1999827 |
|---|
| End bp | 2001449 |
|---|
| Gene Length | 1623 bp |
|---|
| Protein Length | 540 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 639755906 |
|---|
| Product | N-6 DNA methylase |
|---|
| Protein accession | YP_901527 |
|---|
| Protein GI | 118580277 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG0286] Type I restriction-modification system methyltransferase subunit |
|---|
| TIGRFAM ID | [TIGR00497] type I restriction system adenine methylase (hsdM) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATCCCG AGCTGATCAA GACCCTCTGG GCCACCGCCG ACAAGCTGCG CGCCAACATG
GACGCCGCCG AGTACAAGCA CATCGTGCTC GGCCTCATCT TCGTCAAATA CATCTCCGAC
ACCTTCCAGA CTCGCAGCTC TGAGTTGCGG GAGCGCTTCG GCAATCCCGA TGACGAGTAT
TACATCCAGG ATGCCGACGA CGAAACCCTG GTCTGCGAGC TGGAGGACCG GGACTATTAC
CGGGAGGTGA ACACCTTCTG GGTGCCGGAG GCGGCGCGCT GGGAGAATAT CCGGGCGCAG
GCCAAGCAGC CCGACATCGG CAAGCGCATC GACGACGCCC TGACCCTGAT CGAGGCCGAA
AACCCCAAGC TGAAAGGGAT CCTTGACAAA CGCTATGCCC GCGTGCAGCT CCCCGACGGC
AAGCTGGGGG AGCTGGTGGA CATGGTCTCC ACCATCGGTT TCGGCGTCAC CGGGGAGAGC
GCCCGCGACA TCCTGGGGCA GGTGTACGAG TATTTCCTGG GCCAGTTCGC CAGCGCCGAG
GGGAAGCGGG GCGGCCAGTT CTACACGCCG GCCAGCATCG TCAGGACCCT GGTGGCGATT
CTCGCCCCTC ATCATGGCCA GGTGTACGAC CCCTGCTGCG GTTCCGGCGG CATGTTCGTC
CAATCGGAAA AGTTCATCGA AGCCCACGGC GGCAGGATCG GCGATGTCTC CATCTACGGC
CAGGAGTCCA ACCCCACCAC CTGGCGGCTG GCGGCCATGA ACCTGGCCAT TCGCGGCATC
GACTTCAACC TGGGCAAGGA GCCGGCCGAC ACCTTCGTCC GCAACCAGCA CCCCGACCTG
CGGGCCGACT TCGTGCTGGC CAACCCGCCC TTCAACGTCT CCGACTGGTG GCACCCCAGC
CTGGAGGGTG ACCCGCGCTG GGAGTACGGC ACGCCGCCCC AGGGGAACGC CAACTACGCC
TGGCTGCAGC ACATGCTCTA CCACCTGAAA CCGACCGGCC GGGCCGGCAT CGTGCTGGCC
AACGGTTCCA TGTCCTCCAG CCAGAACTCC GAGGGGGAGA TCCGCCGCGC CCTGGTGGAG
GCGGACAAGG TGGAGGTCAT GGTGGCCATG CCGGGGCAGC TCTTCTTCAA CACCCAGATC
CCGGCCTGCC TCTGGTTCCT GGCCAAACAG AAGAGCGTCC GCCAGGGAGA GGTGCTGTTC
ATCGACGCTC GCAAGCTGGG CACCATGATC AGCCGGGTGC AGATCGAGTT CAGCGACGAG
GATATTCAGA GGATCGCCGA CACCGTGCAT GCGTGGCGTG GTGATGGTGA AATCCCCCTC
AATCCCCCTT TGCCAAAGGG GGAGGCCGAA ACAATTCCCC CCTTTACTAA AGGGGGGCCG
GGGGGGATTT ATCAGGACAT CCCCGGCTTC TGCCGCAGCG TGTCACTTGC CGAAATCGCC
GAGCACGGCC ATGTCCTGAC GCCGGGGCGC TATGTGGGTG CAGAGGCGGT GGAGGACGAC
GACGAGGCAT TCACCGAGAA GATGCAGCGG TTGACCGAGA CCCTGGGCGA GCAGATGGCC
AGGGGCGCGG AACTGGACGA GCTGATACGC CGGAAGCTGG GAGGGCTGGG GTATGAGTTC
TGA
|
|---|
| Protein sequence | MNPELIKTLW ATADKLRANM DAAEYKHIVL GLIFVKYISD TFQTRSSELR ERFGNPDDEY
YIQDADDETL VCELEDRDYY REVNTFWVPE AARWENIRAQ AKQPDIGKRI DDALTLIEAE
NPKLKGILDK RYARVQLPDG KLGELVDMVS TIGFGVTGES ARDILGQVYE YFLGQFASAE
GKRGGQFYTP ASIVRTLVAI LAPHHGQVYD PCCGSGGMFV QSEKFIEAHG GRIGDVSIYG
QESNPTTWRL AAMNLAIRGI DFNLGKEPAD TFVRNQHPDL RADFVLANPP FNVSDWWHPS
LEGDPRWEYG TPPQGNANYA WLQHMLYHLK PTGRAGIVLA NGSMSSSQNS EGEIRRALVE
ADKVEVMVAM PGQLFFNTQI PACLWFLAKQ KSVRQGEVLF IDARKLGTMI SRVQIEFSDE
DIQRIADTVH AWRGDGEIPL NPPLPKGEAE TIPPFTKGGP GGIYQDIPGF CRSVSLAEIA
EHGHVLTPGR YVGAEAVEDD DEAFTEKMQR LTETLGEQMA RGAELDELIR RKLGGLGYEF
|
|---|
| |