| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ppro_1789 |
|---|
| Symbol | |
|---|
| ID | 4571716 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pelobacter propionicus DSM 2379 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008609 |
|---|
| Strand | - |
|---|
| Start bp | 1915908 |
|---|
| End bp | 1916516 |
|---|
| Gene Length | 609 bp |
|---|
| Protein Length | 202 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639755837 |
|---|
| Product | Sua5/YciO/YrdC/YwlC family protein |
|---|
| Protein accession | YP_901459 |
|---|
| Protein GI | 118580209 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0009] Putative translation factor (SUA5) |
|---|
| TIGRFAM ID | [TIGR00057] Sua5/YciO/YrdC/YwlC family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCTTG AAATTCACCC CGAACATCCC CAGCAACGAC TGATCGCACG GGTCGTCGAC
TGCCTGCGCA ATGGCGGCAT TATCGCCTAC CCGACCGATA CGACCTACGG CATCGGCTGT
TCCATTTTCA ACAAAAAGGG AATCGAGCGC ATCTACCGCA TGAAACAGCG CGAACACAAG
AAGCCGTTCT CGTTCATCTG CCCCAACCTC TCGGAAGTGG CCCGCTTCGC CAGGGTCAGC
AACACCGCCT TCAAGATCCT CAAGCGCTAC CTCCCCGGTC CCTACACCTT CGTGCTGGAG
GCGACCCGCG ACGTACCCGA TCTGCTGCTG ACACGGCAGA AGACGGTGGG GATCAGGATC
CCCGATAACC GCATCTGCCT TGAGATCGTG CAGATGCTGG GCAGTCCCAT CGTCACCACC
AGCGCCAACC TGTCCGGCGA CGAACCGACC GGCAACCCCG GTTTCATCGA CGAAATCTTC
GGTCACCAGT TGGACATCGT CGTGGACGGG GGGATACTCA CCAAGGAGGT CAGTTCCGTG
GTGAACCTGG TGAACGATAC CCCGGAGATT ATCAGGGCCG GCATGGGTGA CCTGTCGTGG
TGCTCATGA
|
|---|
| Protein sequence | MLLEIHPEHP QQRLIARVVD CLRNGGIIAY PTDTTYGIGC SIFNKKGIER IYRMKQREHK
KPFSFICPNL SEVARFARVS NTAFKILKRY LPGPYTFVLE ATRDVPDLLL TRQKTVGIRI
PDNRICLEIV QMLGSPIVTT SANLSGDEPT GNPGFIDEIF GHQLDIVVDG GILTKEVSSV
VNLVNDTPEI IRAGMGDLSW CS
|
|---|
| |