Gene Ppro_1652 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPpro_1652 
Symbol 
ID4572292 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePelobacter propionicus DSM 2379 
KingdomBacteria 
Replicon accessionNC_008609 
Strand- 
Start bp1770978 
End bp1772183 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content61% 
IMG OID639755695 
ProductGTP cyclohydrolase II 
Protein accessionYP_901324 
Protein GI118580074 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0108] 3,4-dihydroxy-2-butanone 4-phosphate synthase
[COG0807] GTP cyclohydrolase II 
TIGRFAM ID[TIGR00505] GTP cyclohydrolase II
[TIGR00506] 3,4-dihydroxy-2-butanone 4-phosphate synthase 


Plasmid Coverage information

Num covering plasmid clones6 
Plasmid unclonability p-value0.000854469 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTGTAT CGAGTACCGA AGAAGCAATC GAGGATATCC GTCAGGGAAA GATGGTCATC 
CTGGTGGATG ATGAAGATCG TGAAAACGAG GGTGACCTTA CCCTGGCTGC CGAGGCGGCA 
ACCCCGGAAA ACATCAACTT CATGGCAAAA TACGGCCGCG GCCTGATCTG CCTGACACTG 
ACACCGGACA AATGCGACGC GCTCGGCCTG CGTCCCATGG TGCGCGACAA TACATCTCCT 
TTCGAGACCG CCTTCACCGT TTCCATCGAG GCAAAAAGCG GGGTCACCAC CGGCATCTCG 
GCCGCCGATC GCGCCCACAC CATCCTCACC GCCGTCGCCG ACAATGCAAC CCCCAAGGAC 
CTGGTCAGCC CCGGCCATGT CTTTCCGCTG CGGGCTCGCA AGGGGGGTGT GCTGGTGCGA 
TCAGGACAGA CCGAGGGGTC CGTGGACCTG GCCCGTCTGG CCGGCTTGCG CCCCGCCGGT 
GTAATCTGCG AGATCATGAA CGACGACGGC AGCATGTCCC GCATGCCGGA GCTGAAGAAG 
TTCGCCAAGC ATCACGGCAT CAAGATCTGC ACCGTTGCCG ACCTGGTTGC CTACCGGCTC 
AGGACCGAGC GGCTGGTACG CACGGTGGCC GAAGCCCAGA TCCCCTCCCG CTTCGGCGGC 
GACTGGCGCG CCGTTGCCTT CGAAAACGAC GTGGACCACC TGGAGCACAT CGCCCTGGTA 
AAGGGGGAAA TCAAAAAGGG AGAGCCGGTG CTGGTGCGGG TGCACTCGGA ATGTCTGACC 
GGGGACGTGC TGGGGAGTCA GCGCTGCGAT TGCGGCGACC AGTTGCACAG CGCCATGCGC 
AAGATCGCCG AAGAGGGCAA AGGAGTCATC CTCTATATGC GCCAGGAAGG ACGCGGCATC 
GGCCTGGTGA ACAAACTCAA GGCATACGAA CTGCAGGACA AGGGGCTGGA CACGGTGGAA 
GCAAACCTGA AGCTGGGCTT CAAGGCCGAC CTGAGGGATT ACGGCATCGG CGCCCAGATC 
CTGCTGGCGC TGGGAATCAC CAAGATCCGG CTTTTGACCA ACAACCCCAA GAAGCTGATC 
GGCCTGCAGG GATACGGCAT CGACATCGTG GACCGGGTCT CCATCGAGAT GGTGGCGACG 
GAAAACAACA TCGACTATCT CACCACCAAG CGCGACAAGC TCGGCCACAT GCTGGAGAAC 
CTCTAG
 
Protein sequence
MSVSSTEEAI EDIRQGKMVI LVDDEDRENE GDLTLAAEAA TPENINFMAK YGRGLICLTL 
TPDKCDALGL RPMVRDNTSP FETAFTVSIE AKSGVTTGIS AADRAHTILT AVADNATPKD 
LVSPGHVFPL RARKGGVLVR SGQTEGSVDL ARLAGLRPAG VICEIMNDDG SMSRMPELKK 
FAKHHGIKIC TVADLVAYRL RTERLVRTVA EAQIPSRFGG DWRAVAFEND VDHLEHIALV 
KGEIKKGEPV LVRVHSECLT GDVLGSQRCD CGDQLHSAMR KIAEEGKGVI LYMRQEGRGI 
GLVNKLKAYE LQDKGLDTVE ANLKLGFKAD LRDYGIGAQI LLALGITKIR LLTNNPKKLI 
GLQGYGIDIV DRVSIEMVAT ENNIDYLTTK RDKLGHMLEN L